Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.67■□□□□ 0.58
MT-ND4P03905 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MT-ND4P03905 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
MT-ND4P03905 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MT-ND4P03905 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MT-ND4P03905 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MT-ND4P03905 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MT-ND4P03905 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MT-ND4P03905 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MT-ND4P03905 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.66■□□□□ 0.58
MT-ND4P03905 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MT-ND4P03905 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MT-ND4P03905 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
MT-ND4P03905 AC005703.6-201ENST00000623265 1329 ntBASIC18.66■□□□□ 0.58
MT-ND4P03905 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MT-ND4P03905 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.66■□□□□ 0.58
MT-ND4P03905 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.66■□□□□ 0.58
MT-ND4P03905 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MT-ND4P03905 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
MT-ND4P03905 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MT-ND4P03905 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
MT-ND4P03905 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
MT-ND4P03905 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.65■□□□□ 0.58
MT-ND4P03905 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MT-ND4P03905 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MT-ND4P03905 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MT-ND4P03905 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
MT-ND4P03905 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.65■□□□□ 0.58
MT-ND4P03905 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MT-ND4P03905 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.65■□□□□ 0.58
MT-ND4P03905 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MT-ND4P03905 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MT-ND4P03905 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.65■□□□□ 0.58
MT-ND4P03905 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
MT-ND4P03905 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
MT-ND4P03905 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
MT-ND4P03905 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
MT-ND4P03905 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
MT-ND4P03905 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.64■□□□□ 0.57
MT-ND4P03905 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
MT-ND4P03905 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MT-ND4P03905 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.64■□□□□ 0.57
MT-ND4P03905 RNF146-205ENST00000477776 762 ntTSL 3 BASIC18.64■□□□□ 0.57
MT-ND4P03905 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
MT-ND4P03905 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
MT-ND4P03905 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MT-ND4P03905 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
MT-ND4P03905 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
MT-ND4P03905 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MT-ND4P03905 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
MT-ND4P03905 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
MT-ND4P03905 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.63■□□□□ 0.57
MT-ND4P03905 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
MT-ND4P03905 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MT-ND4P03905 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MT-ND4P03905 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.63■□□□□ 0.57
MT-ND4P03905 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.63■□□□□ 0.57
MT-ND4P03905 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MT-ND4P03905 AC144652.1-201ENST00000609974 1624 ntBASIC18.63■□□□□ 0.57
MT-ND4P03905 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
MT-ND4P03905 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MT-ND4P03905 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MT-ND4P03905 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MT-ND4P03905 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
MT-ND4P03905 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MT-ND4P03905 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.62■□□□□ 0.57
MT-ND4P03905 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
MT-ND4P03905 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.62■□□□□ 0.57
MT-ND4P03905 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.62■□□□□ 0.57
MT-ND4P03905 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
MT-ND4P03905 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC18.62■□□□□ 0.57
MT-ND4P03905 AC092028.1-203ENST00000608262 953 ntBASIC18.62■□□□□ 0.57
MT-ND4P03905 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC18.62■□□□□ 0.57
MT-ND4P03905 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
MT-ND4P03905 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
MT-ND4P03905 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MT-ND4P03905 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MT-ND4P03905 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.62■□□□□ 0.57
MT-ND4P03905 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
MT-ND4P03905 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
MT-ND4P03905 Z98882.1-201ENST00000622160 2253 ntBASIC18.62■□□□□ 0.57
MT-ND4P03905 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MT-ND4P03905 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MT-ND4P03905 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MT-ND4P03905 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.61■□□□□ 0.57
MT-ND4P03905 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
MT-ND4P03905 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
MT-ND4P03905 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MT-ND4P03905 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MT-ND4P03905 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
MT-ND4P03905 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.61■□□□□ 0.57
MT-ND4P03905 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MT-ND4P03905 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MT-ND4P03905 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MT-ND4P03905 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MT-ND4P03905 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
MT-ND4P03905 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.61■□□□□ 0.57
MT-ND4P03905 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
MT-ND4P03905 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MT-ND4P03905 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms