Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
URB1O60287 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
URB1O60287 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
URB1O60287 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
URB1O60287 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
URB1O60287 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
URB1O60287 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.37■□□□□ 0.85
URB1O60287 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
URB1O60287 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
URB1O60287 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
URB1O60287 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
URB1O60287 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.36■□□□□ 0.85
URB1O60287 RARRES2P4-201ENST00000514074 484 ntBASIC20.36■□□□□ 0.85
URB1O60287 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
URB1O60287 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.36■□□□□ 0.85
URB1O60287 AC006058.3-201ENST00000606217 1069 ntBASIC20.36■□□□□ 0.85
URB1O60287 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.36■□□□□ 0.85
URB1O60287 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
URB1O60287 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
URB1O60287 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
URB1O60287 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
URB1O60287 AC145676.1-201ENST00000514988 2004 ntBASIC20.36■□□□□ 0.85
URB1O60287 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
URB1O60287 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
URB1O60287 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
URB1O60287 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
URB1O60287 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
URB1O60287 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
URB1O60287 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
URB1O60287 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.36■□□□□ 0.85
URB1O60287 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
URB1O60287 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.36■□□□□ 0.85
URB1O60287 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.36■□□□□ 0.85
URB1O60287 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.36■□□□□ 0.85
URB1O60287 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
URB1O60287 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
URB1O60287 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
URB1O60287 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
URB1O60287 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
URB1O60287 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
URB1O60287 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
URB1O60287 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
URB1O60287 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
URB1O60287 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
URB1O60287 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.34■□□□□ 0.85
URB1O60287 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.34■□□□□ 0.85
URB1O60287 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
URB1O60287 AC128676.1-201ENST00000454392 318 ntBASIC20.34■□□□□ 0.85
URB1O60287 MYC-209ENST00000641252 345 ntBASIC20.34■□□□□ 0.85
URB1O60287 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
URB1O60287 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
URB1O60287 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.34■□□□□ 0.85
URB1O60287 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.34■□□□□ 0.85
URB1O60287 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.34■□□□□ 0.85
URB1O60287 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
URB1O60287 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.34■□□□□ 0.85
URB1O60287 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
URB1O60287 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
URB1O60287 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.34■□□□□ 0.85
URB1O60287 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
URB1O60287 AC010141.3-201ENST00000456659 717 ntBASIC20.34■□□□□ 0.85
URB1O60287 UNC93B4-201ENST00000505679 747 ntBASIC20.34■□□□□ 0.85
URB1O60287 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.34■□□□□ 0.85
URB1O60287 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
URB1O60287 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
URB1O60287 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
URB1O60287 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
URB1O60287 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
URB1O60287 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.33■□□□□ 0.85
URB1O60287 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
URB1O60287 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.33■□□□□ 0.85
URB1O60287 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.33■□□□□ 0.85
URB1O60287 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
URB1O60287 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
URB1O60287 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
URB1O60287 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.84
URB1O60287 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
URB1O60287 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
URB1O60287 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
URB1O60287 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
URB1O60287 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.32■□□□□ 0.84
URB1O60287 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
URB1O60287 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
URB1O60287 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
URB1O60287 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.32■□□□□ 0.84
URB1O60287 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.32■□□□□ 0.84
URB1O60287 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.32■□□□□ 0.84
URB1O60287 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
URB1O60287 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
URB1O60287 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
URB1O60287 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
URB1O60287 UNC93B5-201ENST00000530315 699 ntBASIC20.31■□□□□ 0.84
URB1O60287 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.31■□□□□ 0.84
URB1O60287 AC020928.2-201ENST00000588717 2197 ntBASIC20.31■□□□□ 0.84
URB1O60287 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.31■□□□□ 0.84
URB1O60287 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.31■□□□□ 0.84
URB1O60287 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
URB1O60287 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
URB1O60287 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
URB1O60287 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 176.5 ms