Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TNFRSF11BO00300 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TNFRSF11BO00300 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TNFRSF11BO00300 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TNFRSF11BO00300 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.9■□□□□ 0.78
TNFRSF11BO00300 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.9■□□□□ 0.78
TNFRSF11BO00300 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
TNFRSF11BO00300 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TNFRSF11BO00300 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TNFRSF11BO00300 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TNFRSF11BO00300 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TNFRSF11BO00300 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TNFRSF11BO00300 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TNFRSF11BO00300 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.89■□□□□ 0.77
TNFRSF11BO00300 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
TNFRSF11BO00300 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TNFRSF11BO00300 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.89■□□□□ 0.77
TNFRSF11BO00300 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.89■□□□□ 0.77
TNFRSF11BO00300 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
TNFRSF11BO00300 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
TNFRSF11BO00300 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
TNFRSF11BO00300 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.88■□□□□ 0.77
TNFRSF11BO00300 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
TNFRSF11BO00300 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TNFRSF11BO00300 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TNFRSF11BO00300 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.88■□□□□ 0.77
TNFRSF11BO00300 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
TNFRSF11BO00300 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
TNFRSF11BO00300 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TNFRSF11BO00300 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TNFRSF11BO00300 AC092028.1-203ENST00000608262 953 ntBASIC19.88■□□□□ 0.77
TNFRSF11BO00300 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TNFRSF11BO00300 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TNFRSF11BO00300 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TNFRSF11BO00300 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
TNFRSF11BO00300 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
TNFRSF11BO00300 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
TNFRSF11BO00300 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
TNFRSF11BO00300 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TNFRSF11BO00300 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TNFRSF11BO00300 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TNFRSF11BO00300 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.87■□□□□ 0.77
TNFRSF11BO00300 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.87■□□□□ 0.77
TNFRSF11BO00300 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.87■□□□□ 0.77
TNFRSF11BO00300 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TNFRSF11BO00300 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TNFRSF11BO00300 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.87■□□□□ 0.77
TNFRSF11BO00300 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TNFRSF11BO00300 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TNFRSF11BO00300 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TNFRSF11BO00300 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.86■□□□□ 0.77
TNFRSF11BO00300 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TNFRSF11BO00300 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TNFRSF11BO00300 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TNFRSF11BO00300 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
TNFRSF11BO00300 AL499627.2-201ENST00000606283 725 ntBASIC19.86■□□□□ 0.77
TNFRSF11BO00300 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TNFRSF11BO00300 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TNFRSF11BO00300 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TNFRSF11BO00300 AC073130.3-201ENST00000624389 2278 ntBASIC19.86■□□□□ 0.77
TNFRSF11BO00300 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TNFRSF11BO00300 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TNFRSF11BO00300 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TNFRSF11BO00300 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
TNFRSF11BO00300 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TNFRSF11BO00300 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TNFRSF11BO00300 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TNFRSF11BO00300 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.85■□□□□ 0.77
TNFRSF11BO00300 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TNFRSF11BO00300 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.85■□□□□ 0.77
TNFRSF11BO00300 MTDHP2-201ENST00000601468 714 ntBASIC19.85■□□□□ 0.77
TNFRSF11BO00300 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
TNFRSF11BO00300 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
TNFRSF11BO00300 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TNFRSF11BO00300 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TNFRSF11BO00300 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TNFRSF11BO00300 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.85■□□□□ 0.77
TNFRSF11BO00300 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TNFRSF11BO00300 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TNFRSF11BO00300 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.84■□□□□ 0.77
TNFRSF11BO00300 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.84■□□□□ 0.77
TNFRSF11BO00300 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.84■□□□□ 0.77
TNFRSF11BO00300 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
TNFRSF11BO00300 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TNFRSF11BO00300 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TNFRSF11BO00300 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TNFRSF11BO00300 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TNFRSF11BO00300 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.84■□□□□ 0.77
TNFRSF11BO00300 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
TNFRSF11BO00300 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.84■□□□□ 0.77
TNFRSF11BO00300 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.84■□□□□ 0.77
TNFRSF11BO00300 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TNFRSF11BO00300 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TNFRSF11BO00300 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
TNFRSF11BO00300 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
TNFRSF11BO00300 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.84■□□□□ 0.77
TNFRSF11BO00300 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TNFRSF11BO00300 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
TNFRSF11BO00300 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
TNFRSF11BO00300 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms