Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CNOT1A5YKK6 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
CNOT1A5YKK6 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.86■□□□□ 0.93
CNOT1A5YKK6 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.86■□□□□ 0.93
CNOT1A5YKK6 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
CNOT1A5YKK6 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.86■□□□□ 0.93
CNOT1A5YKK6 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.85■□□□□ 0.93
CNOT1A5YKK6 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNOT1A5YKK6 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CNOT1A5YKK6 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
CNOT1A5YKK6 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.85■□□□□ 0.93
CNOT1A5YKK6 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.85■□□□□ 0.93
CNOT1A5YKK6 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.85■□□□□ 0.93
CNOT1A5YKK6 AC138907.5-202ENST00000569484 235 ntBASIC20.85■□□□□ 0.93
CNOT1A5YKK6 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNOT1A5YKK6 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.85■□□□□ 0.93
CNOT1A5YKK6 AC022211.4-201ENST00000625094 2161 ntBASIC20.85■□□□□ 0.93
CNOT1A5YKK6 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNOT1A5YKK6 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CNOT1A5YKK6 AC010141.3-201ENST00000456659 717 ntBASIC20.85■□□□□ 0.93
CNOT1A5YKK6 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.85■□□□□ 0.93
CNOT1A5YKK6 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.84■□□□□ 0.93
CNOT1A5YKK6 KRT18P20-201ENST00000548986 1279 ntBASIC20.84■□□□□ 0.93
CNOT1A5YKK6 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.84■□□□□ 0.93
CNOT1A5YKK6 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.84■□□□□ 0.93
CNOT1A5YKK6 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNOT1A5YKK6 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.84■□□□□ 0.93
CNOT1A5YKK6 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
CNOT1A5YKK6 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNOT1A5YKK6 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.83■□□□□ 0.93
CNOT1A5YKK6 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
CNOT1A5YKK6 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CNOT1A5YKK6 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CNOT1A5YKK6 AC097658.1-201ENST00000475555 843 ntBASIC20.83■□□□□ 0.93
CNOT1A5YKK6 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CNOT1A5YKK6 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.92
CNOT1A5YKK6 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CNOT1A5YKK6 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNOT1A5YKK6 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.82■□□□□ 0.92
CNOT1A5YKK6 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.82■□□□□ 0.92
CNOT1A5YKK6 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.82■□□□□ 0.92
CNOT1A5YKK6 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.82■□□□□ 0.92
CNOT1A5YKK6 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CNOT1A5YKK6 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.82■□□□□ 0.92
CNOT1A5YKK6 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.82■□□□□ 0.92
CNOT1A5YKK6 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.82■□□□□ 0.92
CNOT1A5YKK6 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.82■□□□□ 0.92
CNOT1A5YKK6 AL445228.2-201ENST00000605589 952 ntBASIC20.82■□□□□ 0.92
CNOT1A5YKK6 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNOT1A5YKK6 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.81■□□□□ 0.92
CNOT1A5YKK6 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.81■□□□□ 0.92
CNOT1A5YKK6 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
CNOT1A5YKK6 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CNOT1A5YKK6 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.81■□□□□ 0.92
CNOT1A5YKK6 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CNOT1A5YKK6 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
CNOT1A5YKK6 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
CNOT1A5YKK6 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CNOT1A5YKK6 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.81■□□□□ 0.92
CNOT1A5YKK6 TERF1P5-201ENST00000477545 1207 ntBASIC20.81■□□□□ 0.92
CNOT1A5YKK6 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.81■□□□□ 0.92
CNOT1A5YKK6 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.81■□□□□ 0.92
CNOT1A5YKK6 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.81■□□□□ 0.92
CNOT1A5YKK6 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.8■□□□□ 0.92
CNOT1A5YKK6 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CNOT1A5YKK6 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.8■□□□□ 0.92
CNOT1A5YKK6 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CNOT1A5YKK6 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.8■□□□□ 0.92
CNOT1A5YKK6 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.8■□□□□ 0.92
CNOT1A5YKK6 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.8■□□□□ 0.92
CNOT1A5YKK6 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.8■□□□□ 0.92
CNOT1A5YKK6 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CNOT1A5YKK6 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
CNOT1A5YKK6 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CNOT1A5YKK6 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.8■□□□□ 0.92
CNOT1A5YKK6 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.8■□□□□ 0.92
CNOT1A5YKK6 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CNOT1A5YKK6 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.79■□□□□ 0.92
CNOT1A5YKK6 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.79■□□□□ 0.92
CNOT1A5YKK6 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.79■□□□□ 0.92
CNOT1A5YKK6 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.79■□□□□ 0.92
CNOT1A5YKK6 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.79■□□□□ 0.92
CNOT1A5YKK6 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CNOT1A5YKK6 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.79■□□□□ 0.92
CNOT1A5YKK6 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CNOT1A5YKK6 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.79■□□□□ 0.92
CNOT1A5YKK6 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CNOT1A5YKK6 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CNOT1A5YKK6 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CNOT1A5YKK6 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNOT1A5YKK6 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNOT1A5YKK6 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.78■□□□□ 0.92
CNOT1A5YKK6 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNOT1A5YKK6 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
CNOT1A5YKK6 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CNOT1A5YKK6 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNOT1A5YKK6 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CNOT1A5YKK6 AC012618.2-201ENST00000428058 849 ntBASIC20.78■□□□□ 0.92
CNOT1A5YKK6 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.78■□□□□ 0.92
CNOT1A5YKK6 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms