Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC29.53■■■□□ 2.32
SBNO1A3KN83 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC29.53■■■□□ 2.32
SBNO1A3KN83 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
SBNO1A3KN83 MIPEPP3-201ENST00000412105 444 ntBASIC29.52■■■□□ 2.32
SBNO1A3KN83 AC007322.4-201ENST00000509611 723 ntBASIC29.52■■■□□ 2.32
SBNO1A3KN83 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC29.52■■■□□ 2.32
SBNO1A3KN83 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC29.52■■■□□ 2.32
SBNO1A3KN83 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
SBNO1A3KN83 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
SBNO1A3KN83 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC29.52■■■□□ 2.32
SBNO1A3KN83 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
SBNO1A3KN83 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC29.52■■■□□ 2.32
SBNO1A3KN83 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC29.52■■■□□ 2.32
SBNO1A3KN83 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC29.52■■■□□ 2.32
SBNO1A3KN83 KRT18P29-201ENST00000397031 1267 ntBASIC29.52■■■□□ 2.32
SBNO1A3KN83 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC29.52■■■□□ 2.32
SBNO1A3KN83 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC29.52■■■□□ 2.32
SBNO1A3KN83 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
SBNO1A3KN83 PPP1R14BP2-201ENST00000426284 444 ntBASIC29.52■■■□□ 2.32
SBNO1A3KN83 SLC7A5P1-201ENST00000568957 537 ntBASIC29.52■■■□□ 2.32
SBNO1A3KN83 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC29.51■■■□□ 2.32
SBNO1A3KN83 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC29.51■■■□□ 2.32
SBNO1A3KN83 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC29.51■■■□□ 2.31
SBNO1A3KN83 DUSP8P5-201ENST00000422884 1815 ntBASIC29.51■■■□□ 2.31
SBNO1A3KN83 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
SBNO1A3KN83 RNA5SP413-201ENST00000516373 109 ntBASIC29.51■■■□□ 2.31
SBNO1A3KN83 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC29.51■■■□□ 2.31
SBNO1A3KN83 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC29.5■■■□□ 2.31
SBNO1A3KN83 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC29.5■■■□□ 2.31
SBNO1A3KN83 AC068338.2-201ENST00000563278 1430 ntBASIC29.5■■■□□ 2.31
SBNO1A3KN83 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
SBNO1A3KN83 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC29.5■■■□□ 2.31
SBNO1A3KN83 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC29.5■■■□□ 2.31
SBNO1A3KN83 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC29.5■■■□□ 2.31
SBNO1A3KN83 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
SBNO1A3KN83 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC29.49■■■□□ 2.31
SBNO1A3KN83 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC29.49■■■□□ 2.31
SBNO1A3KN83 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC29.49■■■□□ 2.31
SBNO1A3KN83 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC29.49■■■□□ 2.31
SBNO1A3KN83 AC092118.2-201ENST00000613495 667 ntBASIC29.49■■■□□ 2.31
SBNO1A3KN83 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
SBNO1A3KN83 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
SBNO1A3KN83 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
SBNO1A3KN83 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC29.48■■■□□ 2.31
SBNO1A3KN83 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC29.48■■■□□ 2.31
SBNO1A3KN83 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC29.47■■■□□ 2.31
SBNO1A3KN83 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
SBNO1A3KN83 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC29.47■■■□□ 2.31
SBNO1A3KN83 AC098590.1-201ENST00000468126 897 ntBASIC29.47■■■□□ 2.31
SBNO1A3KN83 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC29.47■■■□□ 2.31
SBNO1A3KN83 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC29.47■■■□□ 2.31
SBNO1A3KN83 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC29.47■■■□□ 2.31
SBNO1A3KN83 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
SBNO1A3KN83 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC29.46■■■□□ 2.31
SBNO1A3KN83 MKRN4P-201ENST00000444706 1521 ntBASIC29.46■■■□□ 2.31
SBNO1A3KN83 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC29.46■■■□□ 2.31
SBNO1A3KN83 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
SBNO1A3KN83 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
SBNO1A3KN83 RPS2P52-201ENST00000469610 820 ntBASIC29.46■■■□□ 2.31
SBNO1A3KN83 TERF1P5-201ENST00000477545 1207 ntBASIC29.46■■■□□ 2.31
SBNO1A3KN83 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC29.46■■■□□ 2.31
SBNO1A3KN83 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC29.46■■■□□ 2.31
SBNO1A3KN83 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC29.46■■■□□ 2.31
SBNO1A3KN83 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC29.46■■■□□ 2.31
SBNO1A3KN83 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC29.45■■■□□ 2.31
SBNO1A3KN83 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC29.45■■■□□ 2.31
SBNO1A3KN83 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
SBNO1A3KN83 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC29.45■■■□□ 2.31
SBNO1A3KN83 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC29.45■■■□□ 2.31
SBNO1A3KN83 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
SBNO1A3KN83 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC29.45■■■□□ 2.3
SBNO1A3KN83 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC29.44■■■□□ 2.3
SBNO1A3KN83 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC29.44■■■□□ 2.3
SBNO1A3KN83 BET1L-204ENST00000410108 637 ntTSL 3 BASIC29.44■■■□□ 2.3
SBNO1A3KN83 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
SBNO1A3KN83 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC29.44■■■□□ 2.3
SBNO1A3KN83 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
SBNO1A3KN83 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC29.44■■■□□ 2.3
SBNO1A3KN83 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC29.43■■■□□ 2.3
SBNO1A3KN83 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC29.43■■■□□ 2.3
SBNO1A3KN83 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
SBNO1A3KN83 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC29.43■■■□□ 2.3
SBNO1A3KN83 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC29.43■■■□□ 2.3
SBNO1A3KN83 OR10C1-204ENST00000622521 1039 ntBASIC29.43■■■□□ 2.3
SBNO1A3KN83 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC29.43■■■□□ 2.3
SBNO1A3KN83 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC29.43■■■□□ 2.3
SBNO1A3KN83 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC29.43■■■□□ 2.3
SBNO1A3KN83 RARRES2P4-201ENST00000514074 484 ntBASIC29.42■■■□□ 2.3
SBNO1A3KN83 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC29.42■■■□□ 2.3
SBNO1A3KN83 ARL16-209ENST00000573715 763 ntTSL 3 BASIC29.42■■■□□ 2.3
SBNO1A3KN83 ARL16-211ENST00000576135 694 ntTSL 3 BASIC29.42■■■□□ 2.3
SBNO1A3KN83 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC29.42■■■□□ 2.3
SBNO1A3KN83 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC29.42■■■□□ 2.3
SBNO1A3KN83 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
SBNO1A3KN83 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC29.41■■■□□ 2.3
SBNO1A3KN83 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
SBNO1A3KN83 FXN-202ENST00000396364 980 ntTSL 5 BASIC29.41■■■□□ 2.3
SBNO1A3KN83 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC29.41■■■□□ 2.3
SBNO1A3KN83 PHB2-213ENST00000546111 858 ntTSL 2 BASIC29.41■■■□□ 2.3
SBNO1A3KN83 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms