Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV12-1A0A0B4J245 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAV12-1A0A0B4J245 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
TRAV12-1A0A0B4J245 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAV12-1A0A0B4J245 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
TRAV12-1A0A0B4J245 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
TRAV12-1A0A0B4J245 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC15.11■□□□□ 0.01
TRAV12-1A0A0B4J245 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV12-1A0A0B4J245 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV12-1A0A0B4J245 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
TRAV12-1A0A0B4J245 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
TRAV12-1A0A0B4J245 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV12-1A0A0B4J245 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV12-1A0A0B4J245 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
TRAV12-1A0A0B4J245 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAV12-1A0A0B4J245 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV12-1A0A0B4J245 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV12-1A0A0B4J245 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
TRAV12-1A0A0B4J245 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV12-1A0A0B4J245 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV12-1A0A0B4J245 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV12-1A0A0B4J245 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TRAV12-1A0A0B4J245 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV12-1A0A0B4J245 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC15.1■□□□□ 0.01
TRAV12-1A0A0B4J245 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC15.1■□□□□ 0.01
TRAV12-1A0A0B4J245 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV12-1A0A0B4J245 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TRAV12-1A0A0B4J245 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
TRAV12-1A0A0B4J245 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV12-1A0A0B4J245 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAV12-1A0A0B4J245 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV12-1A0A0B4J245 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV12-1A0A0B4J245 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV12-1A0A0B4J245 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAV12-1A0A0B4J245 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV12-1A0A0B4J245 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV12-1A0A0B4J245 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV12-1A0A0B4J245 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV12-1A0A0B4J245 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV12-1A0A0B4J245 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
TRAV12-1A0A0B4J245 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
TRAV12-1A0A0B4J245 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV12-1A0A0B4J245 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV12-1A0A0B4J245 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAV12-1A0A0B4J245 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV12-1A0A0B4J245 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV12-1A0A0B4J245 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV12-1A0A0B4J245 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
TRAV12-1A0A0B4J245 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
TRAV12-1A0A0B4J245 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV12-1A0A0B4J245 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV12-1A0A0B4J245 GABARAPL3-202ENST00000624044 1851 ntBASIC15.09■□□□□ 0.01
TRAV12-1A0A0B4J245 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV12-1A0A0B4J245 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
TRAV12-1A0A0B4J245 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAV12-1A0A0B4J245 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
TRAV12-1A0A0B4J245 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV12-1A0A0B4J245 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRAV12-1A0A0B4J245 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRAV12-1A0A0B4J245 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRAV12-1A0A0B4J245 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC15.08■□□□□ 0
TRAV12-1A0A0B4J245 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV12-1A0A0B4J245 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC15.08■□□□□ 0
TRAV12-1A0A0B4J245 MLEC-202ENST00000412616 841 ntTSL 3 BASIC15.08■□□□□ 0
TRAV12-1A0A0B4J245 GDI1-215ENST00000630693 786 ntTSL 4 BASIC15.08■□□□□ 0
TRAV12-1A0A0B4J245 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC15.08■□□□□ 0
TRAV12-1A0A0B4J245 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV12-1A0A0B4J245 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV12-1A0A0B4J245 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC15.08■□□□□ 0
TRAV12-1A0A0B4J245 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV12-1A0A0B4J245 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRAV12-1A0A0B4J245 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV12-1A0A0B4J245 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0
TRAV12-1A0A0B4J245 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV12-1A0A0B4J245 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV12-1A0A0B4J245 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV12-1A0A0B4J245 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC15.08■□□□□ 0
TRAV12-1A0A0B4J245 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV12-1A0A0B4J245 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV12-1A0A0B4J245 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV12-1A0A0B4J245 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRAV12-1A0A0B4J245 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC15.07■□□□□ 0
TRAV12-1A0A0B4J245 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC15.07■□□□□ 0
TRAV12-1A0A0B4J245 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC15.07■□□□□ 0
TRAV12-1A0A0B4J245 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV12-1A0A0B4J245 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV12-1A0A0B4J245 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC15.07■□□□□ 0
TRAV12-1A0A0B4J245 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
TRAV12-1A0A0B4J245 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
TRAV12-1A0A0B4J245 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV12-1A0A0B4J245 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV12-1A0A0B4J245 ZNRF2P2-203ENST00000454624 420 ntBASIC15.07■□□□□ 0
TRAV12-1A0A0B4J245 MIR3648-2-201ENST00000581792 180 ntBASIC15.07■□□□□ 0
TRAV12-1A0A0B4J245 AC087393.1-201ENST00000582896 145 ntBASIC15.07■□□□□ 0
TRAV12-1A0A0B4J245 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV12-1A0A0B4J245 MIR3648-1-201ENST00000615959 180 ntBASIC15.07■□□□□ 0
TRAV12-1A0A0B4J245 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC15.07■□□□□ 0
TRAV12-1A0A0B4J245 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV12-1A0A0B4J245 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC15.07■□□□□ 0
TRAV12-1A0A0B4J245 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms