Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 PAX5-209ENST00000520154 1255 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
P04436 AC015743.1-201ENST00000524123 795 ntBASIC11.04□□□□□ -0.64
P04436 DHDDS-216ENST00000525682 1235 ntTSL 2 BASIC11.04□□□□□ -0.64
P04436 AC004923.1-201ENST00000527543 776 ntTSL 5 BASIC11.04□□□□□ -0.64
P04436 STAMBP-211ENST00000536064 845 ntTSL 5 BASIC11.04□□□□□ -0.64
P04436 AC007540.1-201ENST00000548473 507 ntTSL 3 BASIC11.04□□□□□ -0.64
P04436 PSME2-213ENST00000560410 755 ntTSL 3 BASIC11.04□□□□□ -0.64
P04436 C16orf52-204ENST00000562695 695 ntTSL 2 BASIC11.04□□□□□ -0.64
P04436 CLDN6-203ENST00000572154 461 ntTSL 3 BASIC11.04□□□□□ -0.64
P04436 AC078880.3-201ENST00000603439 1121 ntBASIC11.04□□□□□ -0.64
P04436 MIR6125-201ENST00000618986 96 ntBASIC11.04□□□□□ -0.64
P04436 AL031601.2-201ENST00000622823 457 ntTSL 3 BASIC11.04□□□□□ -0.64
P04436 AC091905.3-201ENST00000624959 234 ntBASIC11.04□□□□□ -0.64
P04436 PASK-216ENST00000629419 216 ntTSL 5 BASIC11.04□□□□□ -0.64
P04436 TNNT3-216ENST00000641119 941 ntAPPRIS ALT2 BASIC11.04□□□□□ -0.64
P04436 ZNF567-202ENST00000536254 2825 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
P04436 BSCL2-206ENST00000405837 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
P04436 LMX1A-202ENST00000342310 3545 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
P04436 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
P04436 CCNH-203ENST00000504878 1497 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
P04436 COL5A2-203ENST00000618828 6399 ntTSL 5 BASIC11.04□□□□□ -0.64
P04436 SPCS2-209ENST00000610881 2711 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
P04436 KIAA1755-201ENST00000279024 6429 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
P04436 GLDN-210ENST00000612989 1676 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
P04436 ANXA11-205ENST00000438331 6965 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
P04436 DPCR1-203ENST00000636043 5587 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
P04436 ATP2A3-203ENST00000359983 3290 ntTSL 5 BASIC11.04□□□□□ -0.64
P04436 MYO19-203ENST00000610930 3271 ntTSL 5 BASIC11.04□□□□□ -0.64
P04436 PDE4DIP-237ENST00000585156 8439 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
P04436 HHIPL2-201ENST00000343410 2575 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P04436 AC048382.5-201ENST00000618330 3667 ntTSL 5 BASIC11.04□□□□□ -0.64
P04436 ST5-207ENST00000526099 2404 ntTSL 2 BASIC11.04□□□□□ -0.64
P04436 RHOH-217ENST00000610353 2268 ntAPPRIS P1 TSL 4 BASIC11.04□□□□□ -0.64
P04436 TCF4-202ENST00000356073 8317 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
P04436 AGPAT3-203ENST00000398058 4338 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P04436 PPP6R3-204ENST00000393801 5069 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
P04436 CDKL1-203ENST00000395834 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P04436 KIAA0513-206ENST00000566428 7772 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P04436 ESR1-201ENST00000206249 6458 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P04436 DOCK8-201ENST00000382329 6124 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
P04436 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P04436 HTR3E-206ENST00000440596 1449 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
P04436 DNAJB12-204ENST00000461919 2369 ntTSL 2 BASIC11.03□□□□□ -0.64
P04436 SPCS1-206ENST00000619898 4254 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
P04436 SCO1-201ENST00000255390 9612 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P04436 FP475955.3-201ENST00000623678 1612 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
P04436 KANSL1-208ENST00000574590 5147 ntAPPRIS ALT1 TSL 2 BASIC11.03□□□□□ -0.64
P04436 POLR3H-203ENST00000396504 4176 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
P04436 AC087741.1-201ENST00000570309 4399 ntBASIC11.03□□□□□ -0.64
P04436 SLC25A25-203ENST00000373068 3431 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
P04436 APOC2-201ENST00000252490 727 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
P04436 KRTAP4-8-201ENST00000318329 468 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
P04436 GSTM4-202ENST00000336075 657 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P04436 LHX9-202ENST00000367388 758 ntTSL 2 BASIC11.03□□□□□ -0.64
P04436 ELOVL5-202ENST00000370913 580 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
P04436 TIMM23B-201ENST00000374098 1142 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
P04436 SH3YL1-204ENST00000403658 1279 ntTSL 2 BASIC11.03□□□□□ -0.64
P04436 RPP30-203ENST00000413330 1004 ntTSL 5 BASIC11.03□□□□□ -0.64
P04436 AC018511.1-201ENST00000436608 380 ntTSL 5 BASIC11.03□□□□□ -0.64
P04436 TMEM107-205ENST00000449985 1210 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
P04436 SYNPR-205ENST00000465156 829 ntTSL 5 BASIC11.03□□□□□ -0.64
P04436 FCGR2C-202ENST00000466542 1070 ntAPPRIS P5 TSL 1 (best) BASIC11.03□□□□□ -0.64
P04436 RPL18P1-201ENST00000497218 552 ntBASIC11.03□□□□□ -0.64
P04436 FAM153C-208ENST00000511189 926 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
P04436 OPRM1-211ENST00000518759 1060 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
P04436 AC090095.1-201ENST00000519275 871 ntBASIC11.03□□□□□ -0.64
P04436 AL352977.2-201ENST00000557101 547 ntTSL 4 BASIC11.03□□□□□ -0.64
P04436 AC027279.2-201ENST00000561938 793 ntTSL 5 BASIC11.03□□□□□ -0.64
P04436 AC003688.2-201ENST00000576271 415 ntTSL 3 BASIC11.03□□□□□ -0.64
P04436 AC007923.3-201ENST00000578645 292 ntBASIC11.03□□□□□ -0.64
P04436 PTCHD1-AS-202ENST00000608254 557 ntTSL 4 BASIC11.03□□□□□ -0.64
P04436 MIR6893-201ENST00000613458 69 ntBASIC11.03□□□□□ -0.64
P04436 AC027281.2-201ENST00000623856 713 ntBASIC11.03□□□□□ -0.64
P04436 TPRXL-213ENST00000636198 651 ntBASIC11.03□□□□□ -0.64
P04436 GSTM4-213ENST00000638994 657 ntTSL 5 BASIC11.03□□□□□ -0.64
P04436 NDUFAF7-202ENST00000336237 1869 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
P04436 STXBP1-220ENST00000637521 2068 ntTSL 5 BASIC11.03□□□□□ -0.64
P04436 MAML2-201ENST00000524717 7106 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P04436 LRRC8E-206ENST00000618098 3743 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
P04436 C1orf94-201ENST00000373374 2136 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
P04436 PTAFR-201ENST00000305392 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P04436 NR4A3-203ENST00000395097 3794 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
P04436 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
P04436 ZNF423-207ENST00000567169 4017 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
P04436 WDR81-201ENST00000309182 3808 ntTSL 2 BASIC11.03□□□□□ -0.64
P04436 ARHGAP21-203ENST00000396432 7167 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P04436 SEPT9-201ENST00000329047 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
P04436 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
P04436 LHX6-204ENST00000394319 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P04436 ELOVL6-201ENST00000302274 3090 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
P04436 PCDHGB8P-202ENST00000507007 2873 ntBASIC11.02□□□□□ -0.64
P04436 SMIM21-202ENST00000579022 1834 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
P04436 HOXA-AS3-202ENST00000518947 3992 ntTSL 2 BASIC11.02□□□□□ -0.64
P04436 CELF2-AS1-201ENST00000379256 2468 ntTSL 2 BASIC11.02□□□□□ -0.64
P04436 CICP7-201ENST00000432723 2477 ntBASIC11.02□□□□□ -0.64
P04436 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
P04436 LINC01993-201ENST00000374945 2934 ntTSL 2 BASIC11.02□□□□□ -0.64
P04436 ASB9-201ENST00000380483 1612 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
P04436 RHBDL3-201ENST00000269051 4661 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
P04436 HYOU1-221ENST00000621959 3358 ntTSL 2 BASIC11.02□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms