Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 NQO2-205ENST00000380455 10084 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SLC1A1P43005 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SLC1A1P43005 AL445989.1-201ENST00000611641 1436 ntBASIC12.7□□□□□ -0.38
SLC1A1P43005 AC093690.1-201ENST00000418963 2110 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SLC1A1P43005 TEX13D-201ENST00000632372 4203 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
SLC1A1P43005 PRKCQ-201ENST00000263125 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SLC1A1P43005 PDIA6-208ENST00000617249 2344 ntTSL 5 BASIC12.7□□□□□ -0.38
SLC1A1P43005 SP3P-201ENST00000414049 2065 ntBASIC12.69□□□□□ -0.38
SLC1A1P43005 DIAPH3-205ENST00000400324 4804 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
SLC1A1P43005 FUBP1-202ENST00000370767 2524 ntTSL 5 BASIC12.69□□□□□ -0.38
SLC1A1P43005 ATP8B5P-204ENST00000439972 2522 ntTSL 2 BASIC12.69□□□□□ -0.38
SLC1A1P43005 TRUB2-201ENST00000372890 5719 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SLC1A1P43005 AMBRA1-201ENST00000314845 5023 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SLC1A1P43005 THAP5-201ENST00000313516 1568 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SLC1A1P43005 ITIH1-211ENST00000537050 2493 ntTSL 2 BASIC12.69□□□□□ -0.38
SLC1A1P43005 ESR1-201ENST00000206249 6458 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SLC1A1P43005 RAP1GAP2-204ENST00000542807 3110 ntAPPRIS P4 TSL 5 BASIC12.69□□□□□ -0.38
SLC1A1P43005 FAN1-203ENST00000561607 2690 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SLC1A1P43005 JADE1-201ENST00000226319 5772 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
SLC1A1P43005 NCOA4-203ENST00000580070 1755 ntTSL 2 BASIC12.69□□□□□ -0.38
SLC1A1P43005 INS-IGF2-205ENST00000641326 2861 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
SLC1A1P43005 MICAL2-201ENST00000256194 3906 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
SLC1A1P43005 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC12.69□□□□□ -0.38
SLC1A1P43005 ETNK1-201ENST00000266517 7159 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SLC1A1P43005 NEPRO-201ENST00000314400 4992 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SLC1A1P43005 SPG11-201ENST00000261866 7774 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
SLC1A1P43005 AL031686.1-201ENST00000472805 3876 ntTSL 5 BASIC12.69□□□□□ -0.38
SLC1A1P43005 AC010969.2-201ENST00000602458 3231 ntBASIC12.69□□□□□ -0.38
SLC1A1P43005 C19orf71-201ENST00000329493 674 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
SLC1A1P43005 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC12.69□□□□□ -0.38
SLC1A1P43005 AL645998.1-201ENST00000424552 345 ntBASIC12.69□□□□□ -0.38
SLC1A1P43005 AC006967.2-201ENST00000426169 432 ntTSL 3 BASIC12.69□□□□□ -0.38
SLC1A1P43005 SMUG1-213ENST00000506595 712 ntTSL 5 BASIC12.69□□□□□ -0.38
SLC1A1P43005 AP001107.9-202ENST00000531602 613 ntTSL 2 BASIC12.69□□□□□ -0.38
SLC1A1P43005 IMMP1L-213ENST00000533642 314 ntTSL 2 BASIC12.69□□□□□ -0.38
SLC1A1P43005 AC112694.1-202ENST00000540985 943 ntBASIC12.69□□□□□ -0.38
SLC1A1P43005 AC010183.1-201ENST00000552413 559 ntTSL 4 BASIC12.69□□□□□ -0.38
SLC1A1P43005 AL139317.1-201ENST00000554548 196 ntTSL 3 BASIC12.69□□□□□ -0.38
SLC1A1P43005 AC002519.2-201ENST00000563575 539 ntTSL 4 BASIC12.69□□□□□ -0.38
SLC1A1P43005 IGHV3OR16-11-201ENST00000565524 349 ntBASIC12.69□□□□□ -0.38
SLC1A1P43005 AC142381.4-201ENST00000566806 702 ntTSL 3 BASIC12.69□□□□□ -0.38
SLC1A1P43005 AC142086.5-201ENST00000567619 702 ntTSL 5 BASIC12.69□□□□□ -0.38
SLC1A1P43005 HSBP1-204ENST00000570259 1020 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
SLC1A1P43005 AC006116.2-201ENST00000589958 988 ntBASIC12.69□□□□□ -0.38
SLC1A1P43005 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
SLC1A1P43005 RPS5-205ENST00000598495 800 ntTSL 3 BASIC12.69□□□□□ -0.38
SLC1A1P43005 Metazoa_SRP.198-201ENST00000610617 323 ntBASIC12.69□□□□□ -0.38
SLC1A1P43005 MST1R-213ENST00000612032 1065 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SLC1A1P43005 LINC00969-212ENST00000445430 4208 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SLC1A1P43005 ALK-205ENST00000618119 4646 ntTSL 5 BASIC12.69□□□□□ -0.38
SLC1A1P43005 HSPA4-201ENST00000304858 4825 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SLC1A1P43005 HK2P1-201ENST00000447818 2737 ntBASIC12.69□□□□□ -0.38
SLC1A1P43005 ZNF169-204ENST00000481550 1696 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SLC1A1P43005 CLK4-208ENST00000520957 1690 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SLC1A1P43005 CCDC144NL-AS1-216ENST00000582583 1670 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SLC1A1P43005 PPARD-203ENST00000360694 3747 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
SLC1A1P43005 PPP1R17-201ENST00000342032 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SLC1A1P43005 PLEC-202ENST00000345136 14803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SLC1A1P43005 PRKACB-206ENST00000370689 4513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SLC1A1P43005 PMS2-201ENST00000265849 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SLC1A1P43005 FP565260.3-202ENST00000623960 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SLC1A1P43005 TIFAB-201ENST00000537858 5923 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SLC1A1P43005 CEP63-216ENST00000620544 1601 ntTSL 5 BASIC12.69□□□□□ -0.38
SLC1A1P43005 MAGEA9B-203ENST00000595065 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SLC1A1P43005 ICOS-201ENST00000316386 2645 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SLC1A1P43005 WBP11-201ENST00000261167 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SLC1A1P43005 CACNA1F-201ENST00000323022 6037 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SLC1A1P43005 LRTM2-208ENST00000543818 3986 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
SLC1A1P43005 UGDH-AS1-201ENST00000504032 2787 ntTSL 2 BASIC12.69□□□□□ -0.38
SLC1A1P43005 NCAM1-230ENST00000621850 2787 ntTSL 5 BASIC12.69□□□□□ -0.38
SLC1A1P43005 AC110615.1-201ENST00000438151 1955 ntBASIC12.69□□□□□ -0.38
SLC1A1P43005 LARP4-207ENST00000518561 1578 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SLC1A1P43005 RPL13-201ENST00000311528 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SLC1A1P43005 RBM12-202ENST00000374104 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SLC1A1P43005 CDKL3-201ENST00000265334 2130 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
SLC1A1P43005 SMCR8-201ENST00000406438 8279 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SLC1A1P43005 CDC20P1-201ENST00000488829 1500 ntBASIC12.68□□□□□ -0.38
SLC1A1P43005 AP002409.1-201ENST00000584722 2295 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SLC1A1P43005 AL683813.1-201ENST00000435597 3018 ntTSL 2 BASIC12.68□□□□□ -0.38
SLC1A1P43005 ARHGAP21-203ENST00000396432 7167 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SLC1A1P43005 UCP3-201ENST00000314032 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SLC1A1P43005 C22orf39-202ENST00000399562 3350 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SLC1A1P43005 POLE-201ENST00000320574 7840 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SLC1A1P43005 NCDN-202ENST00000373243 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SLC1A1P43005 ZNF831-203ENST00000637017 10953 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
SLC1A1P43005 LHX6-204ENST00000394319 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SLC1A1P43005 MYLPF-201ENST00000322861 682 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SLC1A1P43005 LYG2-201ENST00000333017 862 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
SLC1A1P43005 PLPP4-201ENST00000369073 1135 ntTSL 5 BASIC12.68□□□□□ -0.38
SLC1A1P43005 MBD3L2-201ENST00000381393 793 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SLC1A1P43005 AC007391.1-201ENST00000433893 504 ntTSL 2 BASIC12.68□□□□□ -0.38
SLC1A1P43005 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SLC1A1P43005 AC026202.1-201ENST00000443087 585 ntTSL 4 BASIC12.68□□□□□ -0.38
SLC1A1P43005 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC12.68□□□□□ -0.38
SLC1A1P43005 AC114939.1-201ENST00000520980 514 ntTSL 5 BASIC12.68□□□□□ -0.38
SLC1A1P43005 MRPS27-212ENST00000522095 504 ntTSL 2 BASIC12.68□□□□□ -0.38
SLC1A1P43005 SMCO4-202ENST00000525141 889 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
SLC1A1P43005 AP000911.1-204ENST00000533091 571 ntTSL 4 BASIC12.68□□□□□ -0.38
SLC1A1P43005 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC12.68□□□□□ -0.38
SLC1A1P43005 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 223.6 ms