RNA–Protein interactions for RNA: ENST00000621850.4

NCAM1-230, Transcript of neural cell adhesion molecule 1, humanhuman

TSL 5 BASIC

Gene NCAM1, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAM1-230ENST00000621850 NISCHQ9Y2I1 1504 aa23.87■■□□□ 1.41
NCAM1-230ENST00000621850 SHROOM4Q9ULL8 1493 aa20.8■□□□□ 0.92
NCAM1-230ENST00000621850 SUPT5HO00267 1087 aaKnown RBP20.54■□□□□ 0.88
NCAM1-230ENST00000621850 ZCCHC6Q5VYS8 1495 aaKnown RBP20.22■□□□□ 0.83
NCAM1-230ENST00000621850 CCDC180Q9P1Z9 1646 aa20.06■□□□□ 0.8
NCAM1-230ENST00000621850 DCAF8L2P0C7V8 631 aa20.05■□□□□ 0.8
NCAM1-230ENST00000621850 CHIC1Q5VXU3 224 aa19.97■□□□□ 0.79
NCAM1-230ENST00000621850 MYO15BQ96JP2 1530 aa19.94■□□□□ 0.78
NCAM1-230ENST00000621850 HRCP23327 699 aa19.82■□□□□ 0.76
NCAM1-230ENST00000621850 PCGF6Q9BYE7 350 aa19.74■□□□□ 0.75
NCAM1-230ENST00000621850 LOC105371045A0A1W2PR82 267 aa19.49■□□□□ 0.71
NCAM1-230ENST00000621850 DCAF1Q9Y4B6 1507 aa19.47■□□□□ 0.71
NCAM1-230ENST00000621850 PPARGC1BQ86YN6 1023 aaKnown RBP19.47■□□□□ 0.71
NCAM1-230ENST00000621850 TRIM26Q12899 539 aaPredicted RBP19.21■□□□□ 0.67
NCAM1-230ENST00000621850 ABCC9O60706 1549 aa19.13■□□□□ 0.65
NCAM1-230ENST00000621850 TRIM41Q8WV44 630 aa19.05■□□□□ 0.64
NCAM1-230ENST00000621850 SCRIBQ14160 1630 aa19.04■□□□□ 0.64
NCAM1-230ENST00000621850 RSF1Q96T23 1441 aaPredicted RBP19.04■□□□□ 0.64
NCAM1-230ENST00000621850 FAM9AQ8IZU1 332 aaPredicted RBP19.01■□□□□ 0.63
NCAM1-230ENST00000621850 EHMT2Q96KQ7 1210 aa18.93■□□□□ 0.62
NCAM1-230ENST00000621850 RB1CC1Q8TDY2 1594 aa18.89■□□□□ 0.61
NCAM1-230ENST00000621850 ZEB1P37275 1124 aaPredicted RBP18.87■□□□□ 0.61
NCAM1-230ENST00000621850 AEBP2Q6ZN18 517 aaPredicted RBP18.7■□□□□ 0.58
NCAM1-230ENST00000621850 CECR2Q9BXF3 1484 aa18.68■□□□□ 0.58
NCAM1-230ENST00000621850 MROH2BQ7Z745 1585 aa18.62■□□□□ 0.57
NCAM1-230ENST00000621850 NACADO15069 1562 aa18.55■□□□□ 0.56
NCAM1-230ENST00000621850 WIZO95785 1651 aa18.54■□□□□ 0.56
NCAM1-230ENST00000621850 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.47■□□□□ 0.55
NCAM1-230ENST00000621850 SCAF1Q9H7N4 1312 aaKnown RBP18.46■□□□□ 0.55
NCAM1-230ENST00000621850 CCER1Q8TC90 406 aaPredicted RBP18.44■□□□□ 0.54
NCAM1-230ENST00000621850 TTBK1Q5TCY1 1321 aaPredicted RBP18.38■□□□□ 0.53
NCAM1-230ENST00000621850 BAZ1AQ9NRL2 1556 aaPredicted RBP18.37■□□□□ 0.53
NCAM1-230ENST00000621850 PELP1Q8IZL8 1130 aaKnown RBP18.32■□□□□ 0.52
NCAM1-230ENST00000621850 EIF4G1Q04637 1599 aaKnown RBP18.28■□□□□ 0.52
NCAM1-230ENST00000621850 ABCC8Q09428 1581 aa18.27■□□□□ 0.52
NCAM1-230ENST00000621850 CCDC88BA6NC98 1476 aa18.25■□□□□ 0.51
NCAM1-230ENST00000621850 CEP162Q5TB80 1403 aa18.19■□□□□ 0.5
NCAM1-230ENST00000621850 DIEXFQ68CQ4 756 aaKnown RBP18.19■□□□□ 0.5
NCAM1-230ENST00000621850 TOP2AP11388 1531 aaKnown RBP18.19■□□□□ 0.5
NCAM1-230ENST00000621850 ACIN1Q9UKV3 1341 aaKnown RBP18.18■□□□□ 0.5
NCAM1-230ENST00000621850 NEUROD1Q13562 356 aa18.17■□□□□ 0.5
NCAM1-230ENST00000621850 SOGA1O94964 1423 aa18.16■□□□□ 0.5
NCAM1-230ENST00000621850 UBTFP17480 764 aaKnown RBP18.15■□□□□ 0.5
NCAM1-230ENST00000621850 WRNQ14191 1432 aaPredicted RBP eCLIP18.15■□□□□ 0.5
NCAM1-230ENST00000621850 SMARCA4P51532 1647 aa18.12■□□□□ 0.49
NCAM1-230ENST00000621850 SMARCA2P51531 1590 aa18.11■□□□□ 0.49
NCAM1-230ENST00000621850 CSRNP3Q8WYN3 585 aa18.1■□□□□ 0.49
NCAM1-230ENST00000621850 TNIKQ9UKE5 1360 aa18.09■□□□□ 0.49
NCAM1-230ENST00000621850 CENPBP07199 599 aaPredicted RBP18.07■□□□□ 0.48
NCAM1-230ENST00000621850 RUSC2Q8N2Y8 1516 aa18.05■□□□□ 0.48
NCAM1-230ENST00000621850 GTF3C3Q9Y5Q9 886 aa18.04■□□□□ 0.48
NCAM1-230ENST00000621850 EEA1Q15075 1411 aa18.01■□□□□ 0.47
NCAM1-230ENST00000621850 GOLGA3Q08378 1498 aa17.96■□□□□ 0.46
NCAM1-230ENST00000621850 ZNF316A6NFI3 1004 aaPredicted RBP17.95■□□□□ 0.46
NCAM1-230ENST00000621850 PABPN1Q86U42 306 aaKnown RBP eCLIP17.93■□□□□ 0.46
NCAM1-230ENST00000621850 UNC13AQ9UPW8 1703 aa17.93■□□□□ 0.46
NCAM1-230ENST00000621850 HNRNPUL2Q1KMD3 747 aaKnown RBP17.92■□□□□ 0.46
NCAM1-230ENST00000621850 YTHDC1Q96MU7 727 aaKnown RBP17.89■□□□□ 0.45
NCAM1-230ENST00000621850 RANGAP1P46060 587 aaPredicted RBP17.83■□□□□ 0.45
NCAM1-230ENST00000621850 CEP164Q9UPV0 1460 aa17.82■□□□□ 0.44
NCAM1-230ENST00000621850 CLIP1P30622 1438 aa17.8■□□□□ 0.44
NCAM1-230ENST00000621850 APLP2Q06481 763 aa17.8■□□□□ 0.44
NCAM1-230ENST00000621850 SYNJ1O43426 1573 aa17.77■□□□□ 0.44
NCAM1-230ENST00000621850 MIER1Q8N108 512 aa17.76■□□□□ 0.43
NCAM1-230ENST00000621850 KIF21BO75037 1637 aa17.73■□□□□ 0.43
NCAM1-230ENST00000621850 VPS8Q8N3P4 1428 aa17.72■□□□□ 0.43
NCAM1-230ENST00000621850 BICRAQ9NZM4 1560 aa17.71■□□□□ 0.43
NCAM1-230ENST00000621850 RAPGEF2Q9Y4G8 1499 aa17.69■□□□□ 0.42
NCAM1-230ENST00000621850 PEG3Q9GZU2 1588 aa17.67■□□□□ 0.42
NCAM1-230ENST00000621850 BAZ1BQ9UIG0 1483 aaKnown RBP17.63■□□□□ 0.41
NCAM1-230ENST00000621850 ATAD2BQ9ULI0 1458 aa17.62■□□□□ 0.41
NCAM1-230ENST00000621850 TOP2BQ02880 1626 aa17.49■□□□□ 0.39
NCAM1-230ENST00000621850 KANK4Q5T7N3 995 aaPredicted RBP17.48■□□□□ 0.39
NCAM1-230ENST00000621850 DHX57Q6P158 1386 aaKnown RBP17.47■□□□□ 0.39
NCAM1-230ENST00000621850 CLSPNQ9HAW4 1339 aa17.45■□□□□ 0.38
NCAM1-230ENST00000621850 MYT1Q01538 1121 aa17.44■□□□□ 0.38
NCAM1-230ENST00000621850 ARAP1Q96P48 1450 aa17.43■□□□□ 0.38
NCAM1-230ENST00000621850 PRXQ9BXM0 1461 aa17.41■□□□□ 0.38
NCAM1-230ENST00000621850 ITGAEP38570 1179 aa17.4■□□□□ 0.38
NCAM1-230ENST00000621850 ERICH3Q5RHP9 1530 aa17.39■□□□□ 0.38
NCAM1-230ENST00000621850 BIVM-ERCC5R4GMW8 1640 aa17.38■□□□□ 0.37
NCAM1-230ENST00000621850 KIF27Q86VH2 1401 aa17.32■□□□□ 0.36
NCAM1-230ENST00000621850 RRBP1Q9P2E9 1410 aaKnown RBP17.31■□□□□ 0.36
NCAM1-230ENST00000621850 CCNB3Q8WWL7 1395 aa17.3■□□□□ 0.36
NCAM1-230ENST00000621850 CUX1P39880 1505 aa17.3■□□□□ 0.36
NCAM1-230ENST00000621850 SUPT16HQ9Y5B9 1047 aaKnown RBP17.28■□□□□ 0.36
NCAM1-230ENST00000621850 ARHGAP35Q9NRY4 1499 aa17.25■□□□□ 0.35
NCAM1-230ENST00000621850 CUX2O14529 1486 aa17.2■□□□□ 0.34
NCAM1-230ENST00000621850 RAB3GAP2Q9H2M9 1393 aa17.2■□□□□ 0.34
NCAM1-230ENST00000621850 NCAPD3P42695 1498 aa17.19■□□□□ 0.34
NCAM1-230ENST00000621850 HMGXB3Q12766 1538 aa17.17■□□□□ 0.34
NCAM1-230ENST00000621850 KCNH8Q96L42 1107 aa17.17■□□□□ 0.34
NCAM1-230ENST00000621850 CFTRP13569 1480 aa17.15■□□□□ 0.34
NCAM1-230ENST00000621850 FAM50AQ14320 339 aaKnown RBP17.13■□□□□ 0.33
NCAM1-230ENST00000621850 ATP1B4Q9UN42 357 aaPredicted RBP17.12■□□□□ 0.33
NCAM1-230ENST00000621850 IGF1RP08069 1367 aa17.11■□□□□ 0.33
NCAM1-230ENST00000621850 MAPKBP1O60336 1514 aa17.1■□□□□ 0.33
NCAM1-230ENST00000621850 SIN3AQ96ST3 1273 aa17.1■□□□□ 0.33
NCAM1-230ENST00000621850 SETD5Q9C0A6 1442 aa17.09■□□□□ 0.33
NCAM1-230ENST00000621850 DDX10Q13206 875 aaKnown RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms