Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 LRRC8E-206ENST00000618098 3743 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
NPIPA3F8WFD2 PABPC1-219ENST00000522387 2331 ntTSL 2 BASIC11.14□□□□□ -0.63
NPIPA3F8WFD2 IGSF9-202ENST00000368094 4044 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
NPIPA3F8WFD2 CLCC1-207ENST00000369976 2468 ntTSL 2 BASIC11.14□□□□□ -0.63
NPIPA3F8WFD2 BRF2-201ENST00000220659 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
NPIPA3F8WFD2 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
NPIPA3F8WFD2 PHYHIP-201ENST00000321613 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
NPIPA3F8WFD2 CACNB4-201ENST00000201943 1389 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
NPIPA3F8WFD2 TRIM64C-201ENST00000617704 1353 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
NPIPA3F8WFD2 ARHGEF11-201ENST00000361409 5788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
NPIPA3F8WFD2 RALYL-201ENST00000517638 1972 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
NPIPA3F8WFD2 NID2-201ENST00000216286 4811 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
NPIPA3F8WFD2 MIER1-203ENST00000357692 4978 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
NPIPA3F8WFD2 AC080128.2-201ENST00000641520 11863 ntBASIC11.14□□□□□ -0.63
NPIPA3F8WFD2 AAK1-201ENST00000406297 4499 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 P2RX1-201ENST00000225538 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 KIAA0319L-202ENST00000373266 2377 ntTSL 5 BASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 LPO-204ENST00000543544 2350 ntTSL 2 BASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 AC012184.3-201ENST00000562077 1471 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 POPDC2-204ENST00000468801 1345 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 LIG1-201ENST00000263274 3384 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 VAMP7-202ENST00000286448 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 RPS10P7-201ENST00000441932 2329 ntTSL 2 BASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 NCBP2-201ENST00000321256 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 SMARCAD1-204ENST00000457823 4649 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 VCL-202ENST00000372755 6489 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 TMEM239-201ENST00000361033 3892 ntTSL 2 BASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 CAMSAP2-202ENST00000358823 7352 ntAPPRIS P3 TSL 5 BASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 AKTIP-201ENST00000300245 2133 ntAPPRIS ALT1 TSL 5 BASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 TCEAL1-201ENST00000372624 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 TCEAL9-201ENST00000372656 992 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 TCEAL9-202ENST00000372661 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 AP003306.2-201ENST00000400902 485 ntTSL 4 BASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 NBPF17P-201ENST00000401087 2119 ntBASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 SUMF1-203ENST00000405420 1128 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 AL627095.1-201ENST00000414775 321 ntBASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 TUSC8-201ENST00000432701 978 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 TMX3-202ENST00000443099 913 ntTSL 2 BASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 OR52X1P-201ENST00000446117 914 ntBASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 AC007255.1-202ENST00000447171 889 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 XIAP-AS1-201ENST00000458331 482 ntTSL 3 BASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 RN7SL265P-201ENST00000486808 300 ntBASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 RN7SL304P-201ENST00000488028 301 ntBASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 CLDND1-223ENST00000511081 642 ntTSL 2 BASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 SEMA6A-AS1-206ENST00000514214 782 ntTSL 3 BASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 ZNF970P-201ENST00000547456 223 ntBASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 COPZ1-206ENST00000549043 1232 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 AC027279.2-201ENST00000561938 793 ntTSL 5 BASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 MIR4640-201ENST00000581824 90 ntBASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 RN7SL460P-201ENST00000582806 258 ntBASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 AC090616.6-202ENST00000583601 1088 ntBASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 SMIM17-202ENST00000600547 573 ntTSL 4 BASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 DNAJB14-212ENST00000610281 339 ntTSL 5 BASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 MIR7704-201ENST00000610524 59 ntBASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 ARSF-201ENST00000359361 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 TMEM200A-201ENST00000296978 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 ZNF831-203ENST00000637017 10953 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 CDKN2B-201ENST00000276925 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 DLG5-201ENST00000372391 7415 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 AC010148.1-203ENST00000413842 1652 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 POLR3H-203ENST00000396504 4176 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 HSPA2-202ENST00000394709 5400 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 ETF1-202ENST00000499810 3874 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 PTPN4-201ENST00000263708 10300 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 ZNF135-201ENST00000313434 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 DNASE1L1-205ENST00000369809 3008 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 ST3GAL6-202ENST00000394162 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 PRAMEF12-201ENST00000357726 1786 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 BTN2A2-206ENST00000469230 1790 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 ANKRD30BP2-202ENST00000447861 3260 ntTSL 2 BASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 FO681491.1-201ENST00000623586 3260 ntTSL 2 BASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 ARHGEF9-221ENST00000635967 2179 ntTSL 5 BASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 PLK4-209ENST00000513090 3123 ntTSL 2 BASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 TRIM68-201ENST00000300747 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 AC079880.1-201ENST00000603040 2046 ntBASIC11.13□□□□□ -0.63
NPIPA3F8WFD2 FER1L5-205ENST00000623246 6513 ntTSL 5 BASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 CTNNB1-201ENST00000349496 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 PI4KB-202ENST00000368873 3340 ntTSL 2 BASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 OSTM1-AS1-202ENST00000441184 3334 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 XRCC3-202ENST00000553264 3018 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 FAM90A11P-201ENST00000518378 2218 ntBASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 ZNF544-208ENST00000596825 3516 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 SPTBN1-202ENST00000356805 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 ENO4-203ENST00000409522 1840 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 SPCS1-206ENST00000619898 4254 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 WSB1-207ENST00000579733 1670 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 ZNF749-201ENST00000334181 2587 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 MYADM-204ENST00000391770 3056 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 HAMP-201ENST00000222304 558 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 ROPN1B-201ENST00000251776 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 HIST1H1E-201ENST00000304218 754 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 REG3A-201ENST00000305165 718 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms