RNA–Protein interactions for RNA: ENST00000361033.1

TMEM239-201, Transcript of transmembrane protein 239, humanhuman

TSL 2 BASIC

Gene TMEM239, Length 3,892 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM239-201ENST00000361033 NISCHQ9Y2I1 1504 aa23.23■■□□□ 1.31
TMEM239-201ENST00000361033 DCAF8L2P0C7V8 631 aa21.98■■□□□ 1.11
TMEM239-201ENST00000361033 SHROOM4Q9ULL8 1493 aa21.48■■□□□ 1.03
TMEM239-201ENST00000361033 SUPT5HO00267 1087 aaKnown RBP21.33■■□□□ 1.01
TMEM239-201ENST00000361033 EHMT2Q96KQ7 1210 aa20.35■□□□□ 0.85
TMEM239-201ENST00000361033 FAM9AQ8IZU1 332 aaPredicted RBP20■□□□□ 0.79
TMEM239-201ENST00000361033 PCGF6Q9BYE7 350 aa19.8■□□□□ 0.76
TMEM239-201ENST00000361033 CHIC1Q5VXU3 224 aa19.68■□□□□ 0.74
TMEM239-201ENST00000361033 LOC105371045A0A1W2PR82 267 aa19.6■□□□□ 0.73
TMEM239-201ENST00000361033 TRIM41Q8WV44 630 aa19.6■□□□□ 0.73
TMEM239-201ENST00000361033 TTBK1Q5TCY1 1321 aaPredicted RBP19.57■□□□□ 0.72
TMEM239-201ENST00000361033 ABCC9O60706 1549 aa19.48■□□□□ 0.71
TMEM239-201ENST00000361033 PPARGC1BQ86YN6 1023 aaKnown RBP19.39■□□□□ 0.69
TMEM239-201ENST00000361033 ZCCHC6Q5VYS8 1495 aaKnown RBP19.39■□□□□ 0.69
TMEM239-201ENST00000361033 RANGAP1P46060 587 aaPredicted RBP19.31■□□□□ 0.68
TMEM239-201ENST00000361033 PABPN1Q86U42 306 aaKnown RBP eCLIP19.15■□□□□ 0.66
TMEM239-201ENST00000361033 CCDC180Q9P1Z9 1646 aa19.1■□□□□ 0.65
TMEM239-201ENST00000361033 UBTFP17480 764 aaKnown RBP19.06■□□□□ 0.64
TMEM239-201ENST00000361033 SCRIBQ14160 1630 aa18.99■□□□□ 0.63
TMEM239-201ENST00000361033 HRCP23327 699 aa18.98■□□□□ 0.63
TMEM239-201ENST00000361033 TRIM26Q12899 539 aaPredicted RBP18.93■□□□□ 0.62
TMEM239-201ENST00000361033 APLP2Q06481 763 aa18.92■□□□□ 0.62
TMEM239-201ENST00000361033 MYO15BQ96JP2 1530 aa18.89■□□□□ 0.61
TMEM239-201ENST00000361033 CCER1Q8TC90 406 aaPredicted RBP18.87■□□□□ 0.61
TMEM239-201ENST00000361033 ATP1B4Q9UN42 357 aaPredicted RBP18.68■□□□□ 0.58
TMEM239-201ENST00000361033 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.63■□□□□ 0.57
TMEM239-201ENST00000361033 RSF1Q96T23 1441 aaPredicted RBP18.61■□□□□ 0.57
TMEM239-201ENST00000361033 ZEB1P37275 1124 aaPredicted RBP18.59■□□□□ 0.57
TMEM239-201ENST00000361033 HNRNPUL2Q1KMD3 747 aaKnown RBP18.55■□□□□ 0.56
TMEM239-201ENST00000361033 CECR2Q9BXF3 1484 aa18.48■□□□□ 0.55
TMEM239-201ENST00000361033 ITGAEP38570 1179 aa18.47■□□□□ 0.55
TMEM239-201ENST00000361033 DCAF1Q9Y4B6 1507 aa18.4■□□□□ 0.54
TMEM239-201ENST00000361033 YTHDC1Q96MU7 727 aaKnown RBP18.36■□□□□ 0.53
TMEM239-201ENST00000361033 CSRNP3Q8WYN3 585 aa18.33■□□□□ 0.52
TMEM239-201ENST00000361033 RB1CC1Q8TDY2 1594 aa18.24■□□□□ 0.51
TMEM239-201ENST00000361033 NACADO15069 1562 aa18.23■□□□□ 0.51
TMEM239-201ENST00000361033 MROH2BQ7Z745 1585 aa18.21■□□□□ 0.5
TMEM239-201ENST00000361033 P3H3Q8IVL6 736 aa18.1■□□□□ 0.49
TMEM239-201ENST00000361033 CENPBP07199 599 aaPredicted RBP18.09■□□□□ 0.49
TMEM239-201ENST00000361033 DIEXFQ68CQ4 756 aaKnown RBP18.04■□□□□ 0.48
TMEM239-201ENST00000361033 WIZO95785 1651 aa18■□□□□ 0.47
TMEM239-201ENST00000361033 FAM50AQ14320 339 aaKnown RBP17.98■□□□□ 0.47
TMEM239-201ENST00000361033 BAZ1AQ9NRL2 1556 aaPredicted RBP17.96■□□□□ 0.47
TMEM239-201ENST00000361033 ABCC8Q09428 1581 aa17.95■□□□□ 0.46
TMEM239-201ENST00000361033 SOGA1O94964 1423 aa17.95■□□□□ 0.46
TMEM239-201ENST00000361033 ARID3CA6NKF2 412 aa17.9■□□□□ 0.46
TMEM239-201ENST00000361033 CCDC88BA6NC98 1476 aa17.89■□□□□ 0.45
TMEM239-201ENST00000361033 CEP162Q5TB80 1403 aa17.87■□□□□ 0.45
TMEM239-201ENST00000361033 WRNQ14191 1432 aaPredicted RBP eCLIP17.87■□□□□ 0.45
TMEM239-201ENST00000361033 NEUROD1Q13562 356 aa17.85■□□□□ 0.45
TMEM239-201ENST00000361033 BAZ1BQ9UIG0 1483 aaKnown RBP17.82■□□□□ 0.44
TMEM239-201ENST00000361033 CNGB1Q14028 1251 aaPredicted RBP17.79■□□□□ 0.44
TMEM239-201ENST00000361033 CLIP1P30622 1438 aa17.77■□□□□ 0.43
TMEM239-201ENST00000361033 ZNF316A6NFI3 1004 aaPredicted RBP17.73■□□□□ 0.43
TMEM239-201ENST00000361033 FBLN2P98095 1184 aa17.72■□□□□ 0.43
TMEM239-201ENST00000361033 RUSC2Q8N2Y8 1516 aa17.69■□□□□ 0.42
TMEM239-201ENST00000361033 TNIKQ9UKE5 1360 aa17.68■□□□□ 0.42
TMEM239-201ENST00000361033 GOLGA3Q08378 1498 aa17.67■□□□□ 0.42
TMEM239-201ENST00000361033 POLR3GLQ9BT43 218 aa17.66■□□□□ 0.42
TMEM239-201ENST00000361033 GTF3C3Q9Y5Q9 886 aa17.66■□□□□ 0.42
TMEM239-201ENST00000361033 TRIM52Q96A61 297 aa17.61■□□□□ 0.41
TMEM239-201ENST00000361033 TOP2AP11388 1531 aaKnown RBP17.6■□□□□ 0.41
TMEM239-201ENST00000361033 PELP1Q8IZL8 1130 aaKnown RBP17.6■□□□□ 0.41
TMEM239-201ENST00000361033 EEA1Q15075 1411 aa17.59■□□□□ 0.41
TMEM239-201ENST00000361033 SMARCA4P51532 1647 aa17.59■□□□□ 0.41
TMEM239-201ENST00000361033 CEP164Q9UPV0 1460 aa17.53■□□□□ 0.4
TMEM239-201ENST00000361033 ACIN1Q9UKV3 1341 aaKnown RBP17.52■□□□□ 0.39
TMEM239-201ENST00000361033 HIRIP3Q9BW71 556 aaPredicted RBP17.5■□□□□ 0.39
TMEM239-201ENST00000361033 ATAD2BQ9ULI0 1458 aa17.49■□□□□ 0.39
TMEM239-201ENST00000361033 KANK4Q5T7N3 995 aaPredicted RBP17.48■□□□□ 0.39
TMEM239-201ENST00000361033 CHIC2Q9UKJ5 165 aa17.48■□□□□ 0.39
TMEM239-201ENST00000361033 MIER1Q8N108 512 aa17.47■□□□□ 0.39
TMEM239-201ENST00000361033 KIF27Q86VH2 1401 aa17.45■□□□□ 0.38
TMEM239-201ENST00000361033 SCAF1Q9H7N4 1312 aaKnown RBP17.45■□□□□ 0.38
TMEM239-201ENST00000361033 SMARCA2P51531 1590 aa17.44■□□□□ 0.38
TMEM239-201ENST00000361033 ZNF326Q5BKZ1 582 aaKnown RBP17.43■□□□□ 0.38
TMEM239-201ENST00000361033 MYT1LQ9UL68 1186 aa17.43■□□□□ 0.38
TMEM239-201ENST00000361033 ZNF777Q9ULD5 760 aaPredicted RBP17.42■□□□□ 0.38
TMEM239-201ENST00000361033 NEFLP07196 543 aa17.41■□□□□ 0.38
TMEM239-201ENST00000361033 RAPGEF2Q9Y4G8 1499 aa17.4■□□□□ 0.38
TMEM239-201ENST00000361033 BCANQ96GW7 911 aa17.4■□□□□ 0.38
TMEM239-201ENST00000361033 CUX2O14529 1486 aa17.38■□□□□ 0.37
TMEM239-201ENST00000361033 DDX10Q13206 875 aaKnown RBP17.37■□□□□ 0.37
TMEM239-201ENST00000361033 VPS8Q8N3P4 1428 aa17.32■□□□□ 0.36
TMEM239-201ENST00000361033 CARMIL1Q5VZK9 1371 aa17.31■□□□□ 0.36
TMEM239-201ENST00000361033 MTUS2Q5JR59 1369 aa17.3■□□□□ 0.36
TMEM239-201ENST00000361033 SIN3AQ96ST3 1273 aa17.3■□□□□ 0.36
TMEM239-201ENST00000361033 RRP7BPQ9NSQ0 103 aa17.29■□□□□ 0.36
TMEM239-201ENST00000361033 TDRD9Q8NDG6 1382 aaKnown RBP17.24■□□□□ 0.35
TMEM239-201ENST00000361033 ANP32CO43423 234 aa17.23■□□□□ 0.35
TMEM239-201ENST00000361033 TONSLQ96HA7 1378 aa17.2■□□□□ 0.34
TMEM239-201ENST00000361033 CCNB3Q8WWL7 1395 aa17.18■□□□□ 0.34
TMEM239-201ENST00000361033 CHMP7Q8WUX9 453 aaPredicted RBP17.18■□□□□ 0.34
TMEM239-201ENST00000361033 CADPSQ9ULU8 1353 aa17.17■□□□□ 0.34
TMEM239-201ENST00000361033 SYNJ1O43426 1573 aa17.15■□□□□ 0.34
TMEM239-201ENST00000361033 BICRAQ9NZM4 1560 aa17.13■□□□□ 0.33
TMEM239-201ENST00000361033 CDK11AQ9UQ88 783 aaPredicted RBP17.11■□□□□ 0.33
TMEM239-201ENST00000361033 SENP3-EIF4A1A0A087X0R7 540 aa17.07■□□□□ 0.32
TMEM239-201ENST00000361033 FHOD3Q2V2M9 1422 aa17.07■□□□□ 0.32
TMEM239-201ENST00000361033 EIF4G1Q04637 1599 aaKnown RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms