RNA–Protein interactions for RNA: ENST00000216286.9

NID2-201, Transcript of nidogen 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NID2, Length 4,811 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID2-201ENST00000216286 DCAF8L2P0C7V8 631 aa22.15■■□□□ 1.14
NID2-201ENST00000216286 NISCHQ9Y2I1 1504 aa22.03■■□□□ 1.12
NID2-201ENST00000216286 SHROOM4Q9ULL8 1493 aa20.46■□□□□ 0.87
NID2-201ENST00000216286 SUPT5HO00267 1087 aaKnown RBP20.35■□□□□ 0.85
NID2-201ENST00000216286 EHMT2Q96KQ7 1210 aa19.57■□□□□ 0.72
NID2-201ENST00000216286 ABCC9O60706 1549 aa19.53■□□□□ 0.72
NID2-201ENST00000216286 PABPN1Q86U42 306 aaKnown RBP eCLIP19.21■□□□□ 0.67
NID2-201ENST00000216286 FAM9AQ8IZU1 332 aaPredicted RBP19.16■□□□□ 0.66
NID2-201ENST00000216286 RANGAP1P46060 587 aaPredicted RBP18.95■□□□□ 0.62
NID2-201ENST00000216286 TRIM41Q8WV44 630 aa18.85■□□□□ 0.61
NID2-201ENST00000216286 APLP2Q06481 763 aa18.8■□□□□ 0.6
NID2-201ENST00000216286 TTBK1Q5TCY1 1321 aaPredicted RBP18.7■□□□□ 0.58
NID2-201ENST00000216286 ATP1B4Q9UN42 357 aaPredicted RBP18.69■□□□□ 0.58
NID2-201ENST00000216286 UBTFP17480 764 aaKnown RBP18.6■□□□□ 0.57
NID2-201ENST00000216286 SCRIBQ14160 1630 aa18.29■□□□□ 0.52
NID2-201ENST00000216286 CCDC180Q9P1Z9 1646 aa18.27■□□□□ 0.51
NID2-201ENST00000216286 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.26■□□□□ 0.51
NID2-201ENST00000216286 HNRNPUL2Q1KMD3 747 aaKnown RBP18.26■□□□□ 0.51
NID2-201ENST00000216286 FBLN2P98095 1184 aa18.18■□□□□ 0.5
NID2-201ENST00000216286 ZCCHC6Q5VYS8 1495 aaKnown RBP18.17■□□□□ 0.5
NID2-201ENST00000216286 PPARGC1BQ86YN6 1023 aaKnown RBP18.09■□□□□ 0.49
NID2-201ENST00000216286 MYT1LQ9UL68 1186 aa18.08■□□□□ 0.49
NID2-201ENST00000216286 RB1CC1Q8TDY2 1594 aa18.06■□□□□ 0.48
NID2-201ENST00000216286 CHIC1Q5VXU3 224 aa18.04■□□□□ 0.48
NID2-201ENST00000216286 PCGF6Q9BYE7 350 aa18■□□□□ 0.47
NID2-201ENST00000216286 LOC105371045A0A1W2PR82 267 aa17.97■□□□□ 0.47
NID2-201ENST00000216286 ITGAEP38570 1179 aa17.87■□□□□ 0.45
NID2-201ENST00000216286 NACADO15069 1562 aa17.85■□□□□ 0.45
NID2-201ENST00000216286 CCER1Q8TC90 406 aaPredicted RBP17.72■□□□□ 0.43
NID2-201ENST00000216286 ARID3CA6NKF2 412 aa17.7■□□□□ 0.42
NID2-201ENST00000216286 P3H3Q8IVL6 736 aa17.68■□□□□ 0.42
NID2-201ENST00000216286 CSRNP3Q8WYN3 585 aa17.55■□□□□ 0.4
NID2-201ENST00000216286 BAZ1BQ9UIG0 1483 aaKnown RBP17.5■□□□□ 0.39
NID2-201ENST00000216286 FAM50AQ14320 339 aaKnown RBP17.5■□□□□ 0.39
NID2-201ENST00000216286 CHMP7Q8WUX9 453 aaPredicted RBP17.48■□□□□ 0.39
NID2-201ENST00000216286 RSF1Q96T23 1441 aaPredicted RBP17.46■□□□□ 0.39
NID2-201ENST00000216286 ERCC6Q03468 1493 aa17.44■□□□□ 0.38
NID2-201ENST00000216286 CECR2Q9BXF3 1484 aa17.44■□□□□ 0.38
NID2-201ENST00000216286 NPM1P06748 294 aaKnown RBP eCLIP17.41■□□□□ 0.38
NID2-201ENST00000216286 DCAF1Q9Y4B6 1507 aa17.38■□□□□ 0.37
NID2-201ENST00000216286 TRIM26Q12899 539 aaPredicted RBP17.34■□□□□ 0.37
NID2-201ENST00000216286 ZNF777Q9ULD5 760 aaPredicted RBP17.34■□□□□ 0.37
NID2-201ENST00000216286 POLR3GLQ9BT43 218 aa17.31■□□□□ 0.36
NID2-201ENST00000216286 TRIM52Q96A61 297 aa17.3■□□□□ 0.36
NID2-201ENST00000216286 BAZ1AQ9NRL2 1556 aaPredicted RBP17.28■□□□□ 0.36
NID2-201ENST00000216286 CDK11AQ9UQ88 783 aaPredicted RBP17.26■□□□□ 0.35
NID2-201ENST00000216286 PLPPR3Q6T4P5 718 aa17.23■□□□□ 0.35
NID2-201ENST00000216286 ZEB1P37275 1124 aaPredicted RBP17.22■□□□□ 0.35
NID2-201ENST00000216286 CNGB1Q14028 1251 aaPredicted RBP17.18■□□□□ 0.34
NID2-201ENST00000216286 SLC4A1APQ9BWU0 796 aaKnown RBP17.13■□□□□ 0.33
NID2-201ENST00000216286 WRNQ14191 1432 aaPredicted RBP eCLIP17.12■□□□□ 0.33
NID2-201ENST00000216286 ESF1Q9H501 851 aaKnown RBP17.12■□□□□ 0.33
NID2-201ENST00000216286 MROH2BQ7Z745 1585 aa17.11■□□□□ 0.33
NID2-201ENST00000216286 KCNH8Q96L42 1107 aa17.1■□□□□ 0.33
NID2-201ENST00000216286 BCANQ96GW7 911 aa17.08■□□□□ 0.32
NID2-201ENST00000216286 MYO15BQ96JP2 1530 aa17.06■□□□□ 0.32
NID2-201ENST00000216286 ZNF326Q5BKZ1 582 aaKnown RBP17.06■□□□□ 0.32
NID2-201ENST00000216286 NEUROD1Q13562 356 aa17.05■□□□□ 0.32
NID2-201ENST00000216286 PDS5BQ9NTI5 1447 aa17.03■□□□□ 0.32
NID2-201ENST00000216286 SMARCA2P51531 1590 aa17.01■□□□□ 0.31
NID2-201ENST00000216286 TRHP20396 242 aaPredicted RBP16.98■□□□□ 0.31
NID2-201ENST00000216286 KIF27Q86VH2 1401 aa16.96■□□□□ 0.31
NID2-201ENST00000216286 CHIC2Q9UKJ5 165 aa16.93■□□□□ 0.3
NID2-201ENST00000216286 CCDC88BA6NC98 1476 aa16.93■□□□□ 0.3
NID2-201ENST00000216286 TDRD9Q8NDG6 1382 aaKnown RBP16.92■□□□□ 0.3
NID2-201ENST00000216286 ATAD2BQ9ULI0 1458 aa16.92■□□□□ 0.3
NID2-201ENST00000216286 CHGAP10645 457 aaKnown RBP16.92■□□□□ 0.3
NID2-201ENST00000216286 CADPSQ9ULU8 1353 aa16.91■□□□□ 0.3
NID2-201ENST00000216286 PLEKHD1A6NEE1 506 aa16.91■□□□□ 0.3
NID2-201ENST00000216286 STAG3Q9UJ98 1225 aa16.9■□□□□ 0.3
NID2-201ENST00000216286 MTUS2Q5JR59 1369 aa16.89■□□□□ 0.3
NID2-201ENST00000216286 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.89■□□□□ 0.29
NID2-201ENST00000216286 CUX2O14529 1486 aa16.88■□□□□ 0.29
NID2-201ENST00000216286 YTHDC1Q96MU7 727 aaKnown RBP16.87■□□□□ 0.29
NID2-201ENST00000216286 TSPY4P0CV99 314 aa16.86■□□□□ 0.29
NID2-201ENST00000216286 TSPY10P0CW01 314 aa16.86■□□□□ 0.29
NID2-201ENST00000216286 CLIP1P30622 1438 aa16.83■□□□□ 0.29
NID2-201ENST00000216286 SOGA1O94964 1423 aa16.82■□□□□ 0.28
NID2-201ENST00000216286 WIZO95785 1651 aa16.8■□□□□ 0.28
NID2-201ENST00000216286 ARID4BQ4LE39 1312 aaPredicted RBP16.8■□□□□ 0.28
NID2-201ENST00000216286 CARMIL1Q5VZK9 1371 aa16.79■□□□□ 0.28
NID2-201ENST00000216286 PELP1Q8IZL8 1130 aaKnown RBP16.76■□□□□ 0.27
NID2-201ENST00000216286 DNAJC5BQ9UF47 199 aa16.76■□□□□ 0.27
NID2-201ENST00000216286 EEA1Q15075 1411 aa16.75■□□□□ 0.27
NID2-201ENST00000216286 EIF4G1Q04637 1599 aaKnown RBP16.74■□□□□ 0.27
NID2-201ENST00000216286 SENP3Q9H4L4 574 aaPredicted RBP16.74■□□□□ 0.27
NID2-201ENST00000216286 SMARCA4P51532 1647 aa16.72■□□□□ 0.27
NID2-201ENST00000216286 CEP164Q9UPV0 1460 aa16.72■□□□□ 0.27
NID2-201ENST00000216286 GOLGA3Q08378 1498 aa16.71■□□□□ 0.27
NID2-201ENST00000216286 HRCP23327 699 aa16.71■□□□□ 0.26
NID2-201ENST00000216286 CFDP1Q9UEE9 299 aaPredicted RBP16.7■□□□□ 0.26
NID2-201ENST00000216286 ABCC8Q09428 1581 aa16.69■□□□□ 0.26
NID2-201ENST00000216286 CENPBP07199 599 aaPredicted RBP16.69■□□□□ 0.26
NID2-201ENST00000216286 TOP2AP11388 1531 aaKnown RBP16.69■□□□□ 0.26
NID2-201ENST00000216286 FANCD2Q9BXW9 1451 aa16.67■□□□□ 0.26
NID2-201ENST00000216286 RRP7BPQ9NSQ0 103 aa16.66■□□□□ 0.26
NID2-201ENST00000216286 CYB5RLQ6IPT4 315 aa16.64■□□□□ 0.25
NID2-201ENST00000216286 CEP162Q5TB80 1403 aa16.63■□□□□ 0.25
NID2-201ENST00000216286 OSCARQ8IYS5 282 aa16.61■□□□□ 0.25
NID2-201ENST00000216286 NCAPD3P42695 1498 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms