Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 AC026271.2-201ENST00000428091 497 ntBASIC17.24■□□□□ 0.35
LSM4Q9Y4Z0 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC17.24■□□□□ 0.35
LSM4Q9Y4Z0 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LSM4Q9Y4Z0 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
LSM4Q9Y4Z0 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
LSM4Q9Y4Z0 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LSM4Q9Y4Z0 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LSM4Q9Y4Z0 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC17.24■□□□□ 0.35
LSM4Q9Y4Z0 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LSM4Q9Y4Z0 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
LSM4Q9Y4Z0 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
LSM4Q9Y4Z0 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
LSM4Q9Y4Z0 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
LSM4Q9Y4Z0 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LSM4Q9Y4Z0 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
LSM4Q9Y4Z0 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
LSM4Q9Y4Z0 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
LSM4Q9Y4Z0 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC17.23■□□□□ 0.35
LSM4Q9Y4Z0 AC092666.2-201ENST00000613287 246 ntBASIC17.23■□□□□ 0.35
LSM4Q9Y4Z0 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC17.23■□□□□ 0.35
LSM4Q9Y4Z0 AL355001.2-201ENST00000620617 1191 ntBASIC17.23■□□□□ 0.35
LSM4Q9Y4Z0 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
LSM4Q9Y4Z0 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
LSM4Q9Y4Z0 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LSM4Q9Y4Z0 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC17.23■□□□□ 0.35
LSM4Q9Y4Z0 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LSM4Q9Y4Z0 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LSM4Q9Y4Z0 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC17.22■□□□□ 0.35
LSM4Q9Y4Z0 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
LSM4Q9Y4Z0 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LSM4Q9Y4Z0 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC17.22■□□□□ 0.35
LSM4Q9Y4Z0 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC17.22■□□□□ 0.35
LSM4Q9Y4Z0 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC17.22■□□□□ 0.35
LSM4Q9Y4Z0 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LSM4Q9Y4Z0 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
LSM4Q9Y4Z0 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LSM4Q9Y4Z0 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LSM4Q9Y4Z0 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC17.22■□□□□ 0.35
LSM4Q9Y4Z0 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC17.22■□□□□ 0.35
LSM4Q9Y4Z0 AC024257.2-201ENST00000549699 147 ntBASIC17.22■□□□□ 0.35
LSM4Q9Y4Z0 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC17.22■□□□□ 0.35
LSM4Q9Y4Z0 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC17.22■□□□□ 0.35
LSM4Q9Y4Z0 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LSM4Q9Y4Z0 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LSM4Q9Y4Z0 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LSM4Q9Y4Z0 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC17.22■□□□□ 0.35
LSM4Q9Y4Z0 AC244015.2-201ENST00000616358 1861 ntBASIC17.22■□□□□ 0.35
LSM4Q9Y4Z0 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LSM4Q9Y4Z0 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LSM4Q9Y4Z0 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
LSM4Q9Y4Z0 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
LSM4Q9Y4Z0 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LSM4Q9Y4Z0 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LSM4Q9Y4Z0 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LSM4Q9Y4Z0 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
LSM4Q9Y4Z0 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC17.21■□□□□ 0.35
LSM4Q9Y4Z0 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LSM4Q9Y4Z0 LGR4-203ENST00000480977 492 ntTSL 2 BASIC17.21■□□□□ 0.35
LSM4Q9Y4Z0 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LSM4Q9Y4Z0 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC17.21■□□□□ 0.35
LSM4Q9Y4Z0 AC009086.3-201ENST00000623486 1008 ntBASIC17.21■□□□□ 0.35
LSM4Q9Y4Z0 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LSM4Q9Y4Z0 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LSM4Q9Y4Z0 GATM-206ENST00000558336 1522 ntTSL 2 BASIC17.21■□□□□ 0.34
LSM4Q9Y4Z0 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC17.21■□□□□ 0.34
LSM4Q9Y4Z0 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.21■□□□□ 0.34
LSM4Q9Y4Z0 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
LSM4Q9Y4Z0 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
LSM4Q9Y4Z0 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LSM4Q9Y4Z0 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LSM4Q9Y4Z0 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LSM4Q9Y4Z0 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LSM4Q9Y4Z0 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.2■□□□□ 0.34
LSM4Q9Y4Z0 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LSM4Q9Y4Z0 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LSM4Q9Y4Z0 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LSM4Q9Y4Z0 HYI-206ENST00000372434 1025 ntTSL 5 BASIC17.2■□□□□ 0.34
LSM4Q9Y4Z0 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.2■□□□□ 0.34
LSM4Q9Y4Z0 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LSM4Q9Y4Z0 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC17.2■□□□□ 0.34
LSM4Q9Y4Z0 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.2■□□□□ 0.34
LSM4Q9Y4Z0 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
LSM4Q9Y4Z0 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC17.2■□□□□ 0.34
LSM4Q9Y4Z0 GOLGA2P6-201ENST00000340929 2049 ntBASIC17.2■□□□□ 0.34
LSM4Q9Y4Z0 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
LSM4Q9Y4Z0 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC17.19■□□□□ 0.34
LSM4Q9Y4Z0 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LSM4Q9Y4Z0 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
LSM4Q9Y4Z0 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LSM4Q9Y4Z0 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC17.19■□□□□ 0.34
LSM4Q9Y4Z0 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
LSM4Q9Y4Z0 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LSM4Q9Y4Z0 DUX4L4-201ENST00000566884 1269 ntBASIC17.19■□□□□ 0.34
LSM4Q9Y4Z0 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
LSM4Q9Y4Z0 CA15P2-201ENST00000611168 834 ntBASIC17.19■□□□□ 0.34
LSM4Q9Y4Z0 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
LSM4Q9Y4Z0 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LSM4Q9Y4Z0 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LSM4Q9Y4Z0 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LSM4Q9Y4Z0 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms