Protein–RNA interactions for Protein: Q9Y4C0

NRXN3, Neurexin-3, humanhuman

Predictions only

Length 1,643 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN3Q9Y4C0 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
NRXN3Q9Y4C0 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
NRXN3Q9Y4C0 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC30.77■■■□□ 2.52
NRXN3Q9Y4C0 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC30.77■■■□□ 2.52
NRXN3Q9Y4C0 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC30.77■■■□□ 2.52
NRXN3Q9Y4C0 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC30.77■■■□□ 2.52
NRXN3Q9Y4C0 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
NRXN3Q9Y4C0 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC30.75■■■□□ 2.51
NRXN3Q9Y4C0 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
NRXN3Q9Y4C0 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
NRXN3Q9Y4C0 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC30.75■■■□□ 2.51
NRXN3Q9Y4C0 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC30.75■■■□□ 2.51
NRXN3Q9Y4C0 PFKL-212ENST00000628044 129 ntTSL 3 BASIC30.75■■■□□ 2.51
NRXN3Q9Y4C0 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC30.75■■■□□ 2.51
NRXN3Q9Y4C0 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC30.74■■■□□ 2.51
NRXN3Q9Y4C0 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC30.74■■■□□ 2.51
NRXN3Q9Y4C0 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC30.74■■■□□ 2.51
NRXN3Q9Y4C0 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
NRXN3Q9Y4C0 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC30.74■■■□□ 2.51
NRXN3Q9Y4C0 AC093827.2-201ENST00000512654 315 ntBASIC30.74■■■□□ 2.51
NRXN3Q9Y4C0 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC30.74■■■□□ 2.51
NRXN3Q9Y4C0 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
NRXN3Q9Y4C0 AC008687.6-201ENST00000596318 630 ntBASIC30.73■■■□□ 2.51
NRXN3Q9Y4C0 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
NRXN3Q9Y4C0 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC30.73■■■□□ 2.51
NRXN3Q9Y4C0 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
NRXN3Q9Y4C0 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
NRXN3Q9Y4C0 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC30.73■■■□□ 2.51
NRXN3Q9Y4C0 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC30.73■■■□□ 2.51
NRXN3Q9Y4C0 KRT18P20-201ENST00000548986 1279 ntBASIC30.73■■■□□ 2.51
NRXN3Q9Y4C0 TBCB-214ENST00000629269 413 ntTSL 5 BASIC30.73■■■□□ 2.51
NRXN3Q9Y4C0 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC30.72■■■□□ 2.51
NRXN3Q9Y4C0 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
NRXN3Q9Y4C0 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC30.72■■■□□ 2.51
NRXN3Q9Y4C0 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC30.72■■■□□ 2.51
NRXN3Q9Y4C0 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC30.72■■■□□ 2.51
NRXN3Q9Y4C0 AC013268.1-206ENST00000638368 961 ntBASIC30.72■■■□□ 2.51
NRXN3Q9Y4C0 AC112229.1-201ENST00000639295 961 ntBASIC30.72■■■□□ 2.51
NRXN3Q9Y4C0 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
NRXN3Q9Y4C0 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC30.72■■■□□ 2.51
NRXN3Q9Y4C0 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC30.71■■■□□ 2.51
NRXN3Q9Y4C0 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC30.71■■■□□ 2.51
NRXN3Q9Y4C0 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
NRXN3Q9Y4C0 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC30.71■■■□□ 2.51
NRXN3Q9Y4C0 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC30.71■■■□□ 2.51
NRXN3Q9Y4C0 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC30.71■■■□□ 2.51
NRXN3Q9Y4C0 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC30.71■■■□□ 2.51
NRXN3Q9Y4C0 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC30.7■■■□□ 2.51
NRXN3Q9Y4C0 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC30.7■■■□□ 2.51
NRXN3Q9Y4C0 AC007322.4-201ENST00000509611 723 ntBASIC30.7■■■□□ 2.51
NRXN3Q9Y4C0 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC30.7■■■□□ 2.51
NRXN3Q9Y4C0 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
NRXN3Q9Y4C0 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC30.7■■■□□ 2.5
NRXN3Q9Y4C0 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
NRXN3Q9Y4C0 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC30.7■■■□□ 2.5
NRXN3Q9Y4C0 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
NRXN3Q9Y4C0 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC30.69■■■□□ 2.5
NRXN3Q9Y4C0 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
NRXN3Q9Y4C0 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC30.69■■■□□ 2.5
NRXN3Q9Y4C0 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
NRXN3Q9Y4C0 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC30.69■■■□□ 2.5
NRXN3Q9Y4C0 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
NRXN3Q9Y4C0 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC30.69■■■□□ 2.5
NRXN3Q9Y4C0 DET1-205ENST00000558413 583 ntTSL 4 BASIC30.69■■■□□ 2.5
NRXN3Q9Y4C0 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC30.69■■■□□ 2.5
NRXN3Q9Y4C0 AC105036.2-201ENST00000569468 176 ntBASIC30.69■■■□□ 2.5
NRXN3Q9Y4C0 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC30.69■■■□□ 2.5
NRXN3Q9Y4C0 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC30.69■■■□□ 2.5
NRXN3Q9Y4C0 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
NRXN3Q9Y4C0 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC30.68■■■□□ 2.5
NRXN3Q9Y4C0 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
NRXN3Q9Y4C0 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC30.68■■■□□ 2.5
NRXN3Q9Y4C0 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC30.68■■■□□ 2.5
NRXN3Q9Y4C0 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
NRXN3Q9Y4C0 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
NRXN3Q9Y4C0 EEF1DP3-203ENST00000566025 782 ntBASIC30.68■■■□□ 2.5
NRXN3Q9Y4C0 AC133041.1-202ENST00000642053 222 ntBASIC30.68■■■□□ 2.5
NRXN3Q9Y4C0 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
NRXN3Q9Y4C0 AC068338.2-201ENST00000563278 1430 ntBASIC30.67■■■□□ 2.5
NRXN3Q9Y4C0 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC30.67■■■□□ 2.5
NRXN3Q9Y4C0 AC098590.1-201ENST00000468126 897 ntBASIC30.67■■■□□ 2.5
NRXN3Q9Y4C0 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC30.67■■■□□ 2.5
NRXN3Q9Y4C0 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC30.67■■■□□ 2.5
NRXN3Q9Y4C0 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
NRXN3Q9Y4C0 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC30.67■■■□□ 2.5
NRXN3Q9Y4C0 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC30.67■■■□□ 2.5
NRXN3Q9Y4C0 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC30.66■■■□□ 2.5
NRXN3Q9Y4C0 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC30.66■■■□□ 2.5
NRXN3Q9Y4C0 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC30.66■■■□□ 2.5
NRXN3Q9Y4C0 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
NRXN3Q9Y4C0 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
NRXN3Q9Y4C0 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC30.66■■■□□ 2.5
NRXN3Q9Y4C0 ITM2C-210ENST00000620962 501 ntBASIC30.66■■■□□ 2.5
NRXN3Q9Y4C0 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
NRXN3Q9Y4C0 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC30.66■■■□□ 2.5
NRXN3Q9Y4C0 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
NRXN3Q9Y4C0 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
NRXN3Q9Y4C0 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC30.66■■■□□ 2.5
NRXN3Q9Y4C0 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
NRXN3Q9Y4C0 POU5F1P3-201ENST00000428824 1078 ntBASIC30.65■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms