Protein–RNA interactions for Protein: Q9UJ98

STAG3, Cohesin subunit SA-3, humanhuman

Predictions only

Length 1,225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG3Q9UJ98 RNA5SP413-201ENST00000516373 109 ntBASIC31.3■■■□□ 2.6
STAG3Q9UJ98 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC31.3■■■□□ 2.6
STAG3Q9UJ98 MIR4758-201ENST00000577688 71 ntBASIC31.3■■■□□ 2.6
STAG3Q9UJ98 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC31.3■■■□□ 2.6
STAG3Q9UJ98 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC31.3■■■□□ 2.6
STAG3Q9UJ98 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
STAG3Q9UJ98 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC31.3■■■□□ 2.6
STAG3Q9UJ98 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC31.29■■■□□ 2.6
STAG3Q9UJ98 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC31.29■■■□□ 2.6
STAG3Q9UJ98 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC31.29■■■□□ 2.6
STAG3Q9UJ98 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
STAG3Q9UJ98 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC31.29■■■□□ 2.6
STAG3Q9UJ98 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC31.29■■■□□ 2.6
STAG3Q9UJ98 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC31.29■■■□□ 2.6
STAG3Q9UJ98 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
STAG3Q9UJ98 AC055733.4-201ENST00000638462 1354 ntBASIC31.29■■■□□ 2.6
STAG3Q9UJ98 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC31.29■■■□□ 2.6
STAG3Q9UJ98 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
STAG3Q9UJ98 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC31.28■■■□□ 2.6
STAG3Q9UJ98 BMP1-204ENST00000397814 836 ntTSL 4 BASIC31.28■■■□□ 2.6
STAG3Q9UJ98 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC31.28■■■□□ 2.6
STAG3Q9UJ98 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC31.28■■■□□ 2.6
STAG3Q9UJ98 ITM2C-210ENST00000620962 501 ntBASIC31.28■■■□□ 2.6
STAG3Q9UJ98 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC31.28■■■□□ 2.6
STAG3Q9UJ98 AC004812.2-201ENST00000611079 2094 ntBASIC31.28■■■□□ 2.6
STAG3Q9UJ98 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC31.27■■■□□ 2.6
STAG3Q9UJ98 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
STAG3Q9UJ98 DUSP8P5-201ENST00000422884 1815 ntBASIC31.27■■■□□ 2.6
STAG3Q9UJ98 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
STAG3Q9UJ98 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC31.27■■■□□ 2.6
STAG3Q9UJ98 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC31.27■■■□□ 2.6
STAG3Q9UJ98 AC010141.2-201ENST00000452426 721 ntBASIC31.27■■■□□ 2.6
STAG3Q9UJ98 KRT18P20-201ENST00000548986 1279 ntBASIC31.27■■■□□ 2.6
STAG3Q9UJ98 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
STAG3Q9UJ98 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
STAG3Q9UJ98 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
STAG3Q9UJ98 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC31.26■■■□□ 2.59
STAG3Q9UJ98 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
STAG3Q9UJ98 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
STAG3Q9UJ98 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC31.26■■■□□ 2.59
STAG3Q9UJ98 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC31.26■■■□□ 2.59
STAG3Q9UJ98 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
STAG3Q9UJ98 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC31.26■■■□□ 2.59
STAG3Q9UJ98 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
STAG3Q9UJ98 LINC01124-201ENST00000409786 2117 ntBASIC31.25■■■□□ 2.59
STAG3Q9UJ98 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC31.25■■■□□ 2.59
STAG3Q9UJ98 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
STAG3Q9UJ98 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC31.25■■■□□ 2.59
STAG3Q9UJ98 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
STAG3Q9UJ98 AC138907.5-202ENST00000569484 235 ntBASIC31.25■■■□□ 2.59
STAG3Q9UJ98 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
STAG3Q9UJ98 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
STAG3Q9UJ98 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
STAG3Q9UJ98 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
STAG3Q9UJ98 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
STAG3Q9UJ98 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
STAG3Q9UJ98 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
STAG3Q9UJ98 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
STAG3Q9UJ98 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC31.24■■■□□ 2.59
STAG3Q9UJ98 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC31.24■■■□□ 2.59
STAG3Q9UJ98 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
STAG3Q9UJ98 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
STAG3Q9UJ98 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC31.23■■■□□ 2.59
STAG3Q9UJ98 AC013268.1-206ENST00000638368 961 ntBASIC31.23■■■□□ 2.59
STAG3Q9UJ98 AC112229.1-201ENST00000639295 961 ntBASIC31.23■■■□□ 2.59
STAG3Q9UJ98 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC31.23■■■□□ 2.59
STAG3Q9UJ98 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC31.23■■■□□ 2.59
STAG3Q9UJ98 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
STAG3Q9UJ98 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC31.22■■■□□ 2.59
STAG3Q9UJ98 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC31.22■■■□□ 2.59
STAG3Q9UJ98 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC31.22■■■□□ 2.59
STAG3Q9UJ98 AL139125.2-201ENST00000623134 1869 ntBASIC31.22■■■□□ 2.59
STAG3Q9UJ98 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC31.22■■■□□ 2.59
STAG3Q9UJ98 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC31.22■■■□□ 2.59
STAG3Q9UJ98 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC31.21■■■□□ 2.59
STAG3Q9UJ98 MIPEPP3-201ENST00000412105 444 ntBASIC31.21■■■□□ 2.59
STAG3Q9UJ98 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC31.21■■■□□ 2.59
STAG3Q9UJ98 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC31.21■■■□□ 2.59
STAG3Q9UJ98 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
STAG3Q9UJ98 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
STAG3Q9UJ98 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC31.21■■■□□ 2.59
STAG3Q9UJ98 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC31.2■■■□□ 2.59
STAG3Q9UJ98 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
STAG3Q9UJ98 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
STAG3Q9UJ98 MKRN4P-201ENST00000444706 1521 ntBASIC31.2■■■□□ 2.59
STAG3Q9UJ98 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC31.2■■■□□ 2.59
STAG3Q9UJ98 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
STAG3Q9UJ98 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
STAG3Q9UJ98 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC31.2■■■□□ 2.59
STAG3Q9UJ98 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
STAG3Q9UJ98 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC31.19■■■□□ 2.58
STAG3Q9UJ98 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC31.19■■■□□ 2.58
STAG3Q9UJ98 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC31.19■■■□□ 2.58
STAG3Q9UJ98 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC31.19■■■□□ 2.58
STAG3Q9UJ98 FXN-202ENST00000396364 980 ntTSL 5 BASIC31.19■■■□□ 2.58
STAG3Q9UJ98 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC31.19■■■□□ 2.58
STAG3Q9UJ98 TERF1P5-201ENST00000477545 1207 ntBASIC31.19■■■□□ 2.58
STAG3Q9UJ98 PHB2-213ENST00000546111 858 ntTSL 2 BASIC31.19■■■□□ 2.58
STAG3Q9UJ98 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC31.19■■■□□ 2.58
STAG3Q9UJ98 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms