Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CYSTM1Q9H1C7 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CYSTM1Q9H1C7 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CYSTM1Q9H1C7 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
CYSTM1Q9H1C7 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
CYSTM1Q9H1C7 AC008894.3-201ENST00000624324 3103 ntBASIC12.71□□□□□ -0.38
CYSTM1Q9H1C7 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CYSTM1Q9H1C7 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CYSTM1Q9H1C7 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC12.7□□□□□ -0.38
CYSTM1Q9H1C7 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC12.7□□□□□ -0.38
CYSTM1Q9H1C7 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CYSTM1Q9H1C7 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CYSTM1Q9H1C7 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CYSTM1Q9H1C7 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CYSTM1Q9H1C7 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CYSTM1Q9H1C7 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CYSTM1Q9H1C7 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CYSTM1Q9H1C7 HLA-L-211ENST00000482052 1765 ntBASIC12.7□□□□□ -0.38
CYSTM1Q9H1C7 AC116562.4-201ENST00000641316 2276 ntBASIC12.7□□□□□ -0.38
CYSTM1Q9H1C7 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
CYSTM1Q9H1C7 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CYSTM1Q9H1C7 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CYSTM1Q9H1C7 FEM1AP4-201ENST00000443167 1987 ntBASIC12.7□□□□□ -0.38
CYSTM1Q9H1C7 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CYSTM1Q9H1C7 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CYSTM1Q9H1C7 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CYSTM1Q9H1C7 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CYSTM1Q9H1C7 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CYSTM1Q9H1C7 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CYSTM1Q9H1C7 LSR-205ENST00000427250 1606 ntTSL 2 BASIC12.7□□□□□ -0.38
CYSTM1Q9H1C7 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
CYSTM1Q9H1C7 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC12.69□□□□□ -0.38
CYSTM1Q9H1C7 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC12.69□□□□□ -0.38
CYSTM1Q9H1C7 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CYSTM1Q9H1C7 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CYSTM1Q9H1C7 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CYSTM1Q9H1C7 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CYSTM1Q9H1C7 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CYSTM1Q9H1C7 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CYSTM1Q9H1C7 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CYSTM1Q9H1C7 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CYSTM1Q9H1C7 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC12.69□□□□□ -0.38
CYSTM1Q9H1C7 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC12.69□□□□□ -0.38
CYSTM1Q9H1C7 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CYSTM1Q9H1C7 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CYSTM1Q9H1C7 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CYSTM1Q9H1C7 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CYSTM1Q9H1C7 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CYSTM1Q9H1C7 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
CYSTM1Q9H1C7 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
CYSTM1Q9H1C7 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC12.69□□□□□ -0.38
CYSTM1Q9H1C7 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CYSTM1Q9H1C7 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
CYSTM1Q9H1C7 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC12.69□□□□□ -0.38
CYSTM1Q9H1C7 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CYSTM1Q9H1C7 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC12.68□□□□□ -0.38
CYSTM1Q9H1C7 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CYSTM1Q9H1C7 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC12.68□□□□□ -0.38
CYSTM1Q9H1C7 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CYSTM1Q9H1C7 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CYSTM1Q9H1C7 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
CYSTM1Q9H1C7 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
CYSTM1Q9H1C7 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CYSTM1Q9H1C7 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CYSTM1Q9H1C7 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC12.68□□□□□ -0.38
CYSTM1Q9H1C7 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
CYSTM1Q9H1C7 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CYSTM1Q9H1C7 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
CYSTM1Q9H1C7 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CYSTM1Q9H1C7 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC12.68□□□□□ -0.38
CYSTM1Q9H1C7 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CYSTM1Q9H1C7 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CYSTM1Q9H1C7 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC12.68□□□□□ -0.38
CYSTM1Q9H1C7 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CYSTM1Q9H1C7 AC139713.2-201ENST00000641328 2723 ntBASIC12.68□□□□□ -0.38
CYSTM1Q9H1C7 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC12.67□□□□□ -0.38
CYSTM1Q9H1C7 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
CYSTM1Q9H1C7 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CYSTM1Q9H1C7 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CYSTM1Q9H1C7 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CYSTM1Q9H1C7 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CYSTM1Q9H1C7 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CYSTM1Q9H1C7 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC12.67□□□□□ -0.38
CYSTM1Q9H1C7 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CYSTM1Q9H1C7 EML3-216ENST00000529309 2909 ntTSL 2 BASIC12.67□□□□□ -0.38
CYSTM1Q9H1C7 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CYSTM1Q9H1C7 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC12.67□□□□□ -0.38
CYSTM1Q9H1C7 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CYSTM1Q9H1C7 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CYSTM1Q9H1C7 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CYSTM1Q9H1C7 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC12.67□□□□□ -0.38
CYSTM1Q9H1C7 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CYSTM1Q9H1C7 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CYSTM1Q9H1C7 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC12.67□□□□□ -0.38
CYSTM1Q9H1C7 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CYSTM1Q9H1C7 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CYSTM1Q9H1C7 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC12.67□□□□□ -0.38
CYSTM1Q9H1C7 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CYSTM1Q9H1C7 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CYSTM1Q9H1C7 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms