Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.7■□□□□ 0.9
CNTNAP3Q9BZ76 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNTNAP3Q9BZ76 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNTNAP3Q9BZ76 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNTNAP3Q9BZ76 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNTNAP3Q9BZ76 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.7■□□□□ 0.9
CNTNAP3Q9BZ76 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.7■□□□□ 0.9
CNTNAP3Q9BZ76 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNTNAP3Q9BZ76 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CNTNAP3Q9BZ76 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNTNAP3Q9BZ76 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNTNAP3Q9BZ76 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CNTNAP3Q9BZ76 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNTNAP3Q9BZ76 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNTNAP3Q9BZ76 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.69■□□□□ 0.9
CNTNAP3Q9BZ76 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC20.69■□□□□ 0.9
CNTNAP3Q9BZ76 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.69■□□□□ 0.9
CNTNAP3Q9BZ76 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.69■□□□□ 0.9
CNTNAP3Q9BZ76 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.69■□□□□ 0.9
CNTNAP3Q9BZ76 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNTNAP3Q9BZ76 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CNTNAP3Q9BZ76 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNTNAP3Q9BZ76 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNTNAP3Q9BZ76 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNTNAP3Q9BZ76 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNTNAP3Q9BZ76 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNTNAP3Q9BZ76 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNTNAP3Q9BZ76 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.68■□□□□ 0.9
CNTNAP3Q9BZ76 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNTNAP3Q9BZ76 BX276092.2-201ENST00000417668 665 ntBASIC20.68■□□□□ 0.9
CNTNAP3Q9BZ76 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNTNAP3Q9BZ76 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CNTNAP3Q9BZ76 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CNTNAP3Q9BZ76 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.68■□□□□ 0.9
CNTNAP3Q9BZ76 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CNTNAP3Q9BZ76 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.67■□□□□ 0.9
CNTNAP3Q9BZ76 AC097639.1-201ENST00000565519 1891 ntBASIC20.67■□□□□ 0.9
CNTNAP3Q9BZ76 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CNTNAP3Q9BZ76 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CNTNAP3Q9BZ76 CYP2T1P-201ENST00000432607 1285 ntBASIC20.67■□□□□ 0.9
CNTNAP3Q9BZ76 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CNTNAP3Q9BZ76 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.67■□□□□ 0.9
CNTNAP3Q9BZ76 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CNTNAP3Q9BZ76 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.67■□□□□ 0.9
CNTNAP3Q9BZ76 C2orf69P4-201ENST00000565394 541 ntBASIC20.67■□□□□ 0.9
CNTNAP3Q9BZ76 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.67■□□□□ 0.9
CNTNAP3Q9BZ76 AC010536.3-201ENST00000620306 533 ntBASIC20.67■□□□□ 0.9
CNTNAP3Q9BZ76 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CNTNAP3Q9BZ76 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CNTNAP3Q9BZ76 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CNTNAP3Q9BZ76 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CNTNAP3Q9BZ76 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNTNAP3Q9BZ76 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CNTNAP3Q9BZ76 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CNTNAP3Q9BZ76 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNTNAP3Q9BZ76 TMPOP1-202ENST00000424642 1267 ntBASIC20.66■□□□□ 0.9
CNTNAP3Q9BZ76 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.66■□□□□ 0.9
CNTNAP3Q9BZ76 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.66■□□□□ 0.9
CNTNAP3Q9BZ76 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNTNAP3Q9BZ76 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.66■□□□□ 0.9
CNTNAP3Q9BZ76 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.66■□□□□ 0.9
CNTNAP3Q9BZ76 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CNTNAP3Q9BZ76 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.66■□□□□ 0.9
CNTNAP3Q9BZ76 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNTNAP3Q9BZ76 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNTNAP3Q9BZ76 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.66■□□□□ 0.9
CNTNAP3Q9BZ76 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CNTNAP3Q9BZ76 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNTNAP3Q9BZ76 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNTNAP3Q9BZ76 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.66■□□□□ 0.9
CNTNAP3Q9BZ76 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNTNAP3Q9BZ76 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNTNAP3Q9BZ76 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNTNAP3Q9BZ76 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CNTNAP3Q9BZ76 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CNTNAP3Q9BZ76 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.65■□□□□ 0.9
CNTNAP3Q9BZ76 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNTNAP3Q9BZ76 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNTNAP3Q9BZ76 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CNTNAP3Q9BZ76 AC093787.1-201ENST00000450396 207 ntBASIC20.65■□□□□ 0.9
CNTNAP3Q9BZ76 RPPH1-201ENST00000516869 333 ntBASIC20.65■□□□□ 0.9
CNTNAP3Q9BZ76 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CNTNAP3Q9BZ76 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.65■□□□□ 0.9
CNTNAP3Q9BZ76 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.65■□□□□ 0.9
CNTNAP3Q9BZ76 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.65■□□□□ 0.9
CNTNAP3Q9BZ76 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.65■□□□□ 0.9
CNTNAP3Q9BZ76 KRT87P-202ENST00000534226 1464 ntBASIC20.64■□□□□ 0.89
CNTNAP3Q9BZ76 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CNTNAP3Q9BZ76 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CNTNAP3Q9BZ76 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.64■□□□□ 0.89
CNTNAP3Q9BZ76 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CNTNAP3Q9BZ76 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.64■□□□□ 0.89
CNTNAP3Q9BZ76 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.64■□□□□ 0.89
CNTNAP3Q9BZ76 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.64■□□□□ 0.89
CNTNAP3Q9BZ76 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.64■□□□□ 0.89
CNTNAP3Q9BZ76 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CNTNAP3Q9BZ76 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CNTNAP3Q9BZ76 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CNTNAP3Q9BZ76 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNTNAP3Q9BZ76 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms