Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 AC009299.2-201ENST00000482477 511 ntBASIC20.54■□□□□ 0.88
ITCHQ96J02 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.54■□□□□ 0.88
ITCHQ96J02 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ITCHQ96J02 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ITCHQ96J02 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ITCHQ96J02 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ITCHQ96J02 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
ITCHQ96J02 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ITCHQ96J02 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.53■□□□□ 0.88
ITCHQ96J02 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
ITCHQ96J02 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ITCHQ96J02 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.53■□□□□ 0.88
ITCHQ96J02 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ITCHQ96J02 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.53■□□□□ 0.88
ITCHQ96J02 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ITCHQ96J02 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
ITCHQ96J02 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ITCHQ96J02 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
ITCHQ96J02 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
ITCHQ96J02 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ITCHQ96J02 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
ITCHQ96J02 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.53■□□□□ 0.88
ITCHQ96J02 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.53■□□□□ 0.88
ITCHQ96J02 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ITCHQ96J02 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
ITCHQ96J02 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ITCHQ96J02 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
ITCHQ96J02 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ITCHQ96J02 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.52■□□□□ 0.88
ITCHQ96J02 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
ITCHQ96J02 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ITCHQ96J02 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ITCHQ96J02 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ITCHQ96J02 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
ITCHQ96J02 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ITCHQ96J02 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ITCHQ96J02 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
ITCHQ96J02 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.51■□□□□ 0.87
ITCHQ96J02 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
ITCHQ96J02 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.51■□□□□ 0.87
ITCHQ96J02 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
ITCHQ96J02 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
ITCHQ96J02 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.51■□□□□ 0.87
ITCHQ96J02 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ITCHQ96J02 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.51■□□□□ 0.87
ITCHQ96J02 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ITCHQ96J02 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ITCHQ96J02 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ITCHQ96J02 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
ITCHQ96J02 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ITCHQ96J02 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ITCHQ96J02 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ITCHQ96J02 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ITCHQ96J02 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ITCHQ96J02 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ITCHQ96J02 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ITCHQ96J02 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
ITCHQ96J02 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.5■□□□□ 0.87
ITCHQ96J02 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.5■□□□□ 0.87
ITCHQ96J02 AL031602.1-201ENST00000633169 911 ntBASIC20.5■□□□□ 0.87
ITCHQ96J02 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
ITCHQ96J02 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
ITCHQ96J02 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ITCHQ96J02 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ITCHQ96J02 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.5■□□□□ 0.87
ITCHQ96J02 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.5■□□□□ 0.87
ITCHQ96J02 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
ITCHQ96J02 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ITCHQ96J02 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
ITCHQ96J02 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.49■□□□□ 0.87
ITCHQ96J02 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ITCHQ96J02 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ITCHQ96J02 AC133637.1-201ENST00000624115 1537 ntBASIC20.49■□□□□ 0.87
ITCHQ96J02 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ITCHQ96J02 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
ITCHQ96J02 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ITCHQ96J02 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
ITCHQ96J02 AC079089.2-201ENST00000531211 1277 ntBASIC20.49■□□□□ 0.87
ITCHQ96J02 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.49■□□□□ 0.87
ITCHQ96J02 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.49■□□□□ 0.87
ITCHQ96J02 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
ITCHQ96J02 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ITCHQ96J02 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ITCHQ96J02 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ITCHQ96J02 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
ITCHQ96J02 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
ITCHQ96J02 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ITCHQ96J02 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ITCHQ96J02 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.48■□□□□ 0.87
ITCHQ96J02 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ITCHQ96J02 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.48■□□□□ 0.87
ITCHQ96J02 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
ITCHQ96J02 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.48■□□□□ 0.87
ITCHQ96J02 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.48■□□□□ 0.87
ITCHQ96J02 UNC93B8-201ENST00000511903 705 ntBASIC20.48■□□□□ 0.87
ITCHQ96J02 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.48■□□□□ 0.87
ITCHQ96J02 AL451085.2-201ENST00000605085 799 ntBASIC20.48■□□□□ 0.87
ITCHQ96J02 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
ITCHQ96J02 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.48■□□□□ 0.87
ITCHQ96J02 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms