Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
RAB40AQ8WXH6 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAB40AQ8WXH6 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
RAB40AQ8WXH6 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAB40AQ8WXH6 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.92■□□□□ 0.62
RAB40AQ8WXH6 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.92■□□□□ 0.62
RAB40AQ8WXH6 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
RAB40AQ8WXH6 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.92■□□□□ 0.62
RAB40AQ8WXH6 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RAB40AQ8WXH6 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RAB40AQ8WXH6 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RAB40AQ8WXH6 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RAB40AQ8WXH6 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAB40AQ8WXH6 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.92■□□□□ 0.62
RAB40AQ8WXH6 AC244015.2-201ENST00000616358 1861 ntBASIC18.92■□□□□ 0.62
RAB40AQ8WXH6 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAB40AQ8WXH6 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
RAB40AQ8WXH6 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB40AQ8WXH6 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB40AQ8WXH6 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB40AQ8WXH6 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB40AQ8WXH6 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RAB40AQ8WXH6 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RAB40AQ8WXH6 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.91■□□□□ 0.62
RAB40AQ8WXH6 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.91■□□□□ 0.62
RAB40AQ8WXH6 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB40AQ8WXH6 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB40AQ8WXH6 AL512631.2-201ENST00000604634 923 ntBASIC18.91■□□□□ 0.62
RAB40AQ8WXH6 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.91■□□□□ 0.62
RAB40AQ8WXH6 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.91■□□□□ 0.62
RAB40AQ8WXH6 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.9■□□□□ 0.62
RAB40AQ8WXH6 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RAB40AQ8WXH6 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB40AQ8WXH6 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB40AQ8WXH6 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB40AQ8WXH6 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.9■□□□□ 0.62
RAB40AQ8WXH6 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.9■□□□□ 0.62
RAB40AQ8WXH6 MIR4466-201ENST00000606121 54 ntBASIC18.9■□□□□ 0.62
RAB40AQ8WXH6 AC005229.4-201ENST00000610085 2198 ntBASIC18.9■□□□□ 0.62
RAB40AQ8WXH6 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB40AQ8WXH6 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB40AQ8WXH6 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RAB40AQ8WXH6 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
RAB40AQ8WXH6 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RAB40AQ8WXH6 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB40AQ8WXH6 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
RAB40AQ8WXH6 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB40AQ8WXH6 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
RAB40AQ8WXH6 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.89■□□□□ 0.62
RAB40AQ8WXH6 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAB40AQ8WXH6 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.89■□□□□ 0.61
RAB40AQ8WXH6 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAB40AQ8WXH6 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RAB40AQ8WXH6 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAB40AQ8WXH6 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAB40AQ8WXH6 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RAB40AQ8WXH6 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAB40AQ8WXH6 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAB40AQ8WXH6 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
RAB40AQ8WXH6 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
RAB40AQ8WXH6 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.89■□□□□ 0.61
RAB40AQ8WXH6 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAB40AQ8WXH6 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAB40AQ8WXH6 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RAB40AQ8WXH6 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB40AQ8WXH6 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB40AQ8WXH6 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RAB40AQ8WXH6 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.88■□□□□ 0.61
RAB40AQ8WXH6 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RAB40AQ8WXH6 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB40AQ8WXH6 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RAB40AQ8WXH6 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
RAB40AQ8WXH6 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB40AQ8WXH6 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB40AQ8WXH6 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RAB40AQ8WXH6 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
RAB40AQ8WXH6 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB40AQ8WXH6 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.88■□□□□ 0.61
RAB40AQ8WXH6 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB40AQ8WXH6 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
RAB40AQ8WXH6 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB40AQ8WXH6 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB40AQ8WXH6 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
RAB40AQ8WXH6 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RAB40AQ8WXH6 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
RAB40AQ8WXH6 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.87■□□□□ 0.61
RAB40AQ8WXH6 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB40AQ8WXH6 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.87■□□□□ 0.61
RAB40AQ8WXH6 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.87■□□□□ 0.61
RAB40AQ8WXH6 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB40AQ8WXH6 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.86■□□□□ 0.61
RAB40AQ8WXH6 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB40AQ8WXH6 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
RAB40AQ8WXH6 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
RAB40AQ8WXH6 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
RAB40AQ8WXH6 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
RAB40AQ8WXH6 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
RAB40AQ8WXH6 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
RAB40AQ8WXH6 AC073130.3-201ENST00000624389 2278 ntBASIC18.86■□□□□ 0.61
RAB40AQ8WXH6 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms