Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
SHKBP1Q8TBC3 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
SHKBP1Q8TBC3 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
SHKBP1Q8TBC3 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
SHKBP1Q8TBC3 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
SHKBP1Q8TBC3 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
SHKBP1Q8TBC3 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC22.75■■□□□ 1.23
SHKBP1Q8TBC3 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
SHKBP1Q8TBC3 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
SHKBP1Q8TBC3 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC22.75■■□□□ 1.23
SHKBP1Q8TBC3 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC22.75■■□□□ 1.23
SHKBP1Q8TBC3 ASL-203ENST00000380839 1765 ntTSL 5 BASIC22.75■■□□□ 1.23
SHKBP1Q8TBC3 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC22.75■■□□□ 1.23
SHKBP1Q8TBC3 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
SHKBP1Q8TBC3 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC22.74■■□□□ 1.23
SHKBP1Q8TBC3 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
SHKBP1Q8TBC3 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
SHKBP1Q8TBC3 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC22.74■■□□□ 1.23
SHKBP1Q8TBC3 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
SHKBP1Q8TBC3 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
SHKBP1Q8TBC3 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
SHKBP1Q8TBC3 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC22.74■■□□□ 1.23
SHKBP1Q8TBC3 DUSP8P5-201ENST00000422884 1815 ntBASIC22.74■■□□□ 1.23
SHKBP1Q8TBC3 ANOS2P-203ENST00000472227 1816 ntBASIC22.74■■□□□ 1.23
SHKBP1Q8TBC3 RAP2CP1-201ENST00000605103 478 ntBASIC22.74■■□□□ 1.23
SHKBP1Q8TBC3 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC22.74■■□□□ 1.23
SHKBP1Q8TBC3 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
SHKBP1Q8TBC3 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
SHKBP1Q8TBC3 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
SHKBP1Q8TBC3 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
SHKBP1Q8TBC3 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
SHKBP1Q8TBC3 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC22.73■■□□□ 1.23
SHKBP1Q8TBC3 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
SHKBP1Q8TBC3 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC22.73■■□□□ 1.23
SHKBP1Q8TBC3 CDCA4P2-201ENST00000441182 718 ntBASIC22.73■■□□□ 1.23
SHKBP1Q8TBC3 CPT2-209ENST00000636935 803 ntTSL 5 BASIC22.73■■□□□ 1.23
SHKBP1Q8TBC3 AC073111.5-205ENST00000641717 521 ntBASIC22.73■■□□□ 1.23
SHKBP1Q8TBC3 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
SHKBP1Q8TBC3 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC22.73■■□□□ 1.23
SHKBP1Q8TBC3 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
SHKBP1Q8TBC3 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
SHKBP1Q8TBC3 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
SHKBP1Q8TBC3 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC22.72■■□□□ 1.23
SHKBP1Q8TBC3 KRT19P1-201ENST00000405746 1186 ntBASIC22.72■■□□□ 1.23
SHKBP1Q8TBC3 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC22.72■■□□□ 1.23
SHKBP1Q8TBC3 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC22.72■■□□□ 1.23
SHKBP1Q8TBC3 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
SHKBP1Q8TBC3 GAS2L1P2-201ENST00000436355 1356 ntBASIC22.72■■□□□ 1.23
SHKBP1Q8TBC3 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
SHKBP1Q8TBC3 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC22.71■■□□□ 1.23
SHKBP1Q8TBC3 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC22.71■■□□□ 1.23
SHKBP1Q8TBC3 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
SHKBP1Q8TBC3 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
SHKBP1Q8TBC3 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC22.71■■□□□ 1.23
SHKBP1Q8TBC3 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
SHKBP1Q8TBC3 AC079140.4-201ENST00000507448 529 ntBASIC22.71■■□□□ 1.23
SHKBP1Q8TBC3 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC22.71■■□□□ 1.23
SHKBP1Q8TBC3 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
SHKBP1Q8TBC3 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
SHKBP1Q8TBC3 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
SHKBP1Q8TBC3 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
SHKBP1Q8TBC3 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
SHKBP1Q8TBC3 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
SHKBP1Q8TBC3 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
SHKBP1Q8TBC3 HLA-L-209ENST00000420110 1011 ntBASIC22.7■■□□□ 1.22
SHKBP1Q8TBC3 TESC-206ENST00000541210 936 ntTSL 3 BASIC22.7■■□□□ 1.22
SHKBP1Q8TBC3 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
SHKBP1Q8TBC3 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC22.7■■□□□ 1.22
SHKBP1Q8TBC3 WWOX-218ENST00000627394 894 ntTSL 5 BASIC22.7■■□□□ 1.22
SHKBP1Q8TBC3 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC22.7■■□□□ 1.22
SHKBP1Q8TBC3 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
SHKBP1Q8TBC3 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
SHKBP1Q8TBC3 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC22.7■■□□□ 1.22
SHKBP1Q8TBC3 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
SHKBP1Q8TBC3 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC22.7■■□□□ 1.22
SHKBP1Q8TBC3 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
SHKBP1Q8TBC3 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC22.69■■□□□ 1.22
SHKBP1Q8TBC3 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC22.69■■□□□ 1.22
SHKBP1Q8TBC3 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC22.69■■□□□ 1.22
SHKBP1Q8TBC3 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC22.69■■□□□ 1.22
SHKBP1Q8TBC3 TK2-208ENST00000545043 1120 ntTSL 2 BASIC22.69■■□□□ 1.22
SHKBP1Q8TBC3 BID-214ENST00000617586 542 ntTSL 5 BASIC22.69■■□□□ 1.22
SHKBP1Q8TBC3 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
SHKBP1Q8TBC3 AC092068.2-201ENST00000590491 1708 ntBASIC22.68■■□□□ 1.22
SHKBP1Q8TBC3 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
SHKBP1Q8TBC3 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC22.68■■□□□ 1.22
SHKBP1Q8TBC3 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SHKBP1Q8TBC3 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
SHKBP1Q8TBC3 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SHKBP1Q8TBC3 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SHKBP1Q8TBC3 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SHKBP1Q8TBC3 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SHKBP1Q8TBC3 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SHKBP1Q8TBC3 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC22.68■■□□□ 1.22
SHKBP1Q8TBC3 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
SHKBP1Q8TBC3 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SHKBP1Q8TBC3 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SHKBP1Q8TBC3 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SHKBP1Q8TBC3 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC22.67■■□□□ 1.22
SHKBP1Q8TBC3 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC22.67■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms