Protein–RNA interactions for Protein: Q86YD5

LDLRAD3, Low-density lipoprotein receptor class A domain-containing protein 3, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3Q86YD5 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.35■□□□□ 0.53
LDLRAD3Q86YD5 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
LDLRAD3Q86YD5 AC080038.3-201ENST00000623346 1952 ntBASIC18.35■□□□□ 0.53
LDLRAD3Q86YD5 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LDLRAD3Q86YD5 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.35■□□□□ 0.53
LDLRAD3Q86YD5 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
LDLRAD3Q86YD5 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LDLRAD3Q86YD5 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LDLRAD3Q86YD5 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LDLRAD3Q86YD5 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LDLRAD3Q86YD5 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LDLRAD3Q86YD5 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LDLRAD3Q86YD5 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.34■□□□□ 0.53
LDLRAD3Q86YD5 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
LDLRAD3Q86YD5 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.34■□□□□ 0.53
LDLRAD3Q86YD5 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LDLRAD3Q86YD5 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
LDLRAD3Q86YD5 AC087742.1-201ENST00000575880 1738 ntBASIC18.34■□□□□ 0.53
LDLRAD3Q86YD5 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
LDLRAD3Q86YD5 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
LDLRAD3Q86YD5 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
LDLRAD3Q86YD5 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
LDLRAD3Q86YD5 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LDLRAD3Q86YD5 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
LDLRAD3Q86YD5 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LDLRAD3Q86YD5 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LDLRAD3Q86YD5 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.33■□□□□ 0.52
LDLRAD3Q86YD5 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.33■□□□□ 0.52
LDLRAD3Q86YD5 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LDLRAD3Q86YD5 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
LDLRAD3Q86YD5 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.33■□□□□ 0.52
LDLRAD3Q86YD5 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
LDLRAD3Q86YD5 AC144652.1-201ENST00000609974 1624 ntBASIC18.33■□□□□ 0.52
LDLRAD3Q86YD5 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.33■□□□□ 0.52
LDLRAD3Q86YD5 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
LDLRAD3Q86YD5 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.33■□□□□ 0.52
LDLRAD3Q86YD5 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.32■□□□□ 0.52
LDLRAD3Q86YD5 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LDLRAD3Q86YD5 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
LDLRAD3Q86YD5 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LDLRAD3Q86YD5 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
LDLRAD3Q86YD5 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LDLRAD3Q86YD5 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LDLRAD3Q86YD5 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LDLRAD3Q86YD5 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.32■□□□□ 0.52
LDLRAD3Q86YD5 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LDLRAD3Q86YD5 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LDLRAD3Q86YD5 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.31■□□□□ 0.52
LDLRAD3Q86YD5 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
LDLRAD3Q86YD5 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LDLRAD3Q86YD5 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LDLRAD3Q86YD5 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
LDLRAD3Q86YD5 EDA-201ENST00000338901 1233 ntBASIC18.31■□□□□ 0.52
LDLRAD3Q86YD5 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LDLRAD3Q86YD5 MIR935-201ENST00000401179 91 ntBASIC18.31■□□□□ 0.52
LDLRAD3Q86YD5 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.31■□□□□ 0.52
LDLRAD3Q86YD5 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LDLRAD3Q86YD5 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.31■□□□□ 0.52
LDLRAD3Q86YD5 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LDLRAD3Q86YD5 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
LDLRAD3Q86YD5 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LDLRAD3Q86YD5 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LDLRAD3Q86YD5 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.31■□□□□ 0.52
LDLRAD3Q86YD5 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
LDLRAD3Q86YD5 AC009102.2-201ENST00000606772 1639 ntBASIC18.31■□□□□ 0.52
LDLRAD3Q86YD5 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
LDLRAD3Q86YD5 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LDLRAD3Q86YD5 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.3■□□□□ 0.52
LDLRAD3Q86YD5 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.3■□□□□ 0.52
LDLRAD3Q86YD5 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
LDLRAD3Q86YD5 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LDLRAD3Q86YD5 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.3■□□□□ 0.52
LDLRAD3Q86YD5 AC024257.2-201ENST00000549699 147 ntBASIC18.3■□□□□ 0.52
LDLRAD3Q86YD5 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LDLRAD3Q86YD5 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LDLRAD3Q86YD5 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LDLRAD3Q86YD5 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
LDLRAD3Q86YD5 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
LDLRAD3Q86YD5 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
LDLRAD3Q86YD5 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LDLRAD3Q86YD5 SYT6-210ENST00000641643 1587 ntBASIC18.3■□□□□ 0.52
LDLRAD3Q86YD5 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LDLRAD3Q86YD5 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LDLRAD3Q86YD5 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LDLRAD3Q86YD5 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.29■□□□□ 0.52
LDLRAD3Q86YD5 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.29■□□□□ 0.52
LDLRAD3Q86YD5 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LDLRAD3Q86YD5 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
LDLRAD3Q86YD5 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LDLRAD3Q86YD5 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.29■□□□□ 0.52
LDLRAD3Q86YD5 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LDLRAD3Q86YD5 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.29■□□□□ 0.52
LDLRAD3Q86YD5 AC142381.2-201ENST00000566120 298 ntBASIC18.29■□□□□ 0.52
LDLRAD3Q86YD5 AL031432.3-201ENST00000607698 485 ntBASIC18.29■□□□□ 0.52
LDLRAD3Q86YD5 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
LDLRAD3Q86YD5 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
LDLRAD3Q86YD5 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LDLRAD3Q86YD5 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LDLRAD3Q86YD5 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LDLRAD3Q86YD5 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms