Protein–RNA interactions for Protein: Q86WB0

ZC3HC1, Nuclear-interacting partner of ALK, humanhuman

Known RBP Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1Q86WB0 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
ZC3HC1Q86WB0 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
ZC3HC1Q86WB0 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.52■■□□□ 1.03
ZC3HC1Q86WB0 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZC3HC1Q86WB0 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZC3HC1Q86WB0 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZC3HC1Q86WB0 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.51■■□□□ 1.03
ZC3HC1Q86WB0 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
ZC3HC1Q86WB0 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ZC3HC1Q86WB0 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZC3HC1Q86WB0 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.51■■□□□ 1.03
ZC3HC1Q86WB0 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
ZC3HC1Q86WB0 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ZC3HC1Q86WB0 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ZC3HC1Q86WB0 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ZC3HC1Q86WB0 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
ZC3HC1Q86WB0 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZC3HC1Q86WB0 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZC3HC1Q86WB0 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
ZC3HC1Q86WB0 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.5■■□□□ 1.03
ZC3HC1Q86WB0 AC010525.1-201ENST00000585559 441 ntBASIC21.5■■□□□ 1.03
ZC3HC1Q86WB0 MIR4466-201ENST00000606121 54 ntBASIC21.5■■□□□ 1.03
ZC3HC1Q86WB0 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZC3HC1Q86WB0 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
ZC3HC1Q86WB0 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZC3HC1Q86WB0 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZC3HC1Q86WB0 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ZC3HC1Q86WB0 OR7E47P-201ENST00000546390 1422 ntBASIC21.49■■□□□ 1.03
ZC3HC1Q86WB0 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZC3HC1Q86WB0 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZC3HC1Q86WB0 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZC3HC1Q86WB0 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ZC3HC1Q86WB0 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.49■■□□□ 1.03
ZC3HC1Q86WB0 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.49■■□□□ 1.03
ZC3HC1Q86WB0 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.49■■□□□ 1.03
ZC3HC1Q86WB0 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZC3HC1Q86WB0 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZC3HC1Q86WB0 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ZC3HC1Q86WB0 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ZC3HC1Q86WB0 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ZC3HC1Q86WB0 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.48■■□□□ 1.03
ZC3HC1Q86WB0 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.48■■□□□ 1.03
ZC3HC1Q86WB0 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ZC3HC1Q86WB0 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.48■■□□□ 1.03
ZC3HC1Q86WB0 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
ZC3HC1Q86WB0 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
ZC3HC1Q86WB0 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ZC3HC1Q86WB0 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
ZC3HC1Q86WB0 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ZC3HC1Q86WB0 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ZC3HC1Q86WB0 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
ZC3HC1Q86WB0 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.47■■□□□ 1.03
ZC3HC1Q86WB0 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ZC3HC1Q86WB0 SERBP1P1-201ENST00000396021 1160 ntBASIC21.47■■□□□ 1.03
ZC3HC1Q86WB0 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.47■■□□□ 1.03
ZC3HC1Q86WB0 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.47■■□□□ 1.03
ZC3HC1Q86WB0 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.47■■□□□ 1.03
ZC3HC1Q86WB0 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ZC3HC1Q86WB0 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.47■■□□□ 1.03
ZC3HC1Q86WB0 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ZC3HC1Q86WB0 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.47■■□□□ 1.03
ZC3HC1Q86WB0 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ZC3HC1Q86WB0 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ZC3HC1Q86WB0 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.47■■□□□ 1.03
ZC3HC1Q86WB0 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.47■■□□□ 1.03
ZC3HC1Q86WB0 AC026471.6-201ENST00000622954 1905 ntBASIC21.47■■□□□ 1.03
ZC3HC1Q86WB0 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
ZC3HC1Q86WB0 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
ZC3HC1Q86WB0 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
ZC3HC1Q86WB0 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.46■■□□□ 1.03
ZC3HC1Q86WB0 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ZC3HC1Q86WB0 AL138724.1-201ENST00000606771 1088 ntBASIC21.46■■□□□ 1.03
ZC3HC1Q86WB0 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.46■■□□□ 1.03
ZC3HC1Q86WB0 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ZC3HC1Q86WB0 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.46■■□□□ 1.03
ZC3HC1Q86WB0 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.46■■□□□ 1.03
ZC3HC1Q86WB0 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
ZC3HC1Q86WB0 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
ZC3HC1Q86WB0 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
ZC3HC1Q86WB0 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.45■■□□□ 1.02
ZC3HC1Q86WB0 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
ZC3HC1Q86WB0 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ZC3HC1Q86WB0 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
ZC3HC1Q86WB0 AC010141.3-201ENST00000456659 717 ntBASIC21.45■■□□□ 1.02
ZC3HC1Q86WB0 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ZC3HC1Q86WB0 AC087239.1-201ENST00000622671 572 ntBASIC21.45■■□□□ 1.02
ZC3HC1Q86WB0 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
ZC3HC1Q86WB0 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ZC3HC1Q86WB0 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
ZC3HC1Q86WB0 SYT6-210ENST00000641643 1587 ntBASIC21.44■■□□□ 1.02
ZC3HC1Q86WB0 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ZC3HC1Q86WB0 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ZC3HC1Q86WB0 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.44■■□□□ 1.02
ZC3HC1Q86WB0 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ZC3HC1Q86WB0 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
ZC3HC1Q86WB0 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
ZC3HC1Q86WB0 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.44■■□□□ 1.02
ZC3HC1Q86WB0 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ZC3HC1Q86WB0 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.44■■□□□ 1.02
ZC3HC1Q86WB0 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms