Protein–RNA interactions for Protein: Q53T59

HS1BP3, HCLS1-binding protein 3, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS1BP3Q53T59 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
HS1BP3Q53T59 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
HS1BP3Q53T59 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
HS1BP3Q53T59 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
HS1BP3Q53T59 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
HS1BP3Q53T59 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC24.11■■□□□ 1.45
HS1BP3Q53T59 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC24.11■■□□□ 1.45
HS1BP3Q53T59 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
HS1BP3Q53T59 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
HS1BP3Q53T59 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC24.11■■□□□ 1.45
HS1BP3Q53T59 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC24.11■■□□□ 1.45
HS1BP3Q53T59 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
HS1BP3Q53T59 AC010980.1-201ENST00000587192 1142 ntBASIC24.11■■□□□ 1.45
HS1BP3Q53T59 AL035685.1-201ENST00000636663 812 ntBASIC24.11■■□□□ 1.45
HS1BP3Q53T59 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
HS1BP3Q53T59 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC24.11■■□□□ 1.45
HS1BP3Q53T59 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC24.11■■□□□ 1.45
HS1BP3Q53T59 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC24.11■■□□□ 1.45
HS1BP3Q53T59 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC24.11■■□□□ 1.45
HS1BP3Q53T59 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
HS1BP3Q53T59 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC24.11■■□□□ 1.45
HS1BP3Q53T59 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
HS1BP3Q53T59 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
HS1BP3Q53T59 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
HS1BP3Q53T59 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
HS1BP3Q53T59 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
HS1BP3Q53T59 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC24.1■■□□□ 1.45
HS1BP3Q53T59 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
HS1BP3Q53T59 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
HS1BP3Q53T59 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
HS1BP3Q53T59 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
HS1BP3Q53T59 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
HS1BP3Q53T59 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
HS1BP3Q53T59 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
HS1BP3Q53T59 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
HS1BP3Q53T59 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
HS1BP3Q53T59 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
HS1BP3Q53T59 ME2-206ENST00000638410 2289 ntTSL 5 BASIC24.09■■□□□ 1.45
HS1BP3Q53T59 ME2-210ENST00000639255 2262 ntTSL 5 BASIC24.09■■□□□ 1.45
HS1BP3Q53T59 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC24.09■■□□□ 1.45
HS1BP3Q53T59 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
HS1BP3Q53T59 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
HS1BP3Q53T59 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
HS1BP3Q53T59 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
HS1BP3Q53T59 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC24.09■■□□□ 1.45
HS1BP3Q53T59 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
HS1BP3Q53T59 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC24.09■■□□□ 1.45
HS1BP3Q53T59 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
HS1BP3Q53T59 KRT8P33-201ENST00000508125 1423 ntBASIC24.09■■□□□ 1.45
HS1BP3Q53T59 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
HS1BP3Q53T59 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC24.08■■□□□ 1.45
HS1BP3Q53T59 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
HS1BP3Q53T59 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC24.08■■□□□ 1.45
HS1BP3Q53T59 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC24.08■■□□□ 1.45
HS1BP3Q53T59 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC24.08■■□□□ 1.45
HS1BP3Q53T59 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
HS1BP3Q53T59 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
HS1BP3Q53T59 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC24.08■■□□□ 1.45
HS1BP3Q53T59 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
HS1BP3Q53T59 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
HS1BP3Q53T59 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC24.07■■□□□ 1.44
HS1BP3Q53T59 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC24.07■■□□□ 1.44
HS1BP3Q53T59 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
HS1BP3Q53T59 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
HS1BP3Q53T59 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
HS1BP3Q53T59 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
HS1BP3Q53T59 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC24.07■■□□□ 1.44
HS1BP3Q53T59 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
HS1BP3Q53T59 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
HS1BP3Q53T59 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
HS1BP3Q53T59 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
HS1BP3Q53T59 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
HS1BP3Q53T59 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
HS1BP3Q53T59 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
HS1BP3Q53T59 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
HS1BP3Q53T59 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC24.06■■□□□ 1.44
HS1BP3Q53T59 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC24.06■■□□□ 1.44
HS1BP3Q53T59 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC24.06■■□□□ 1.44
HS1BP3Q53T59 TRIR-205ENST00000592273 783 ntTSL 3 BASIC24.06■■□□□ 1.44
HS1BP3Q53T59 AL451085.2-201ENST00000605085 799 ntBASIC24.06■■□□□ 1.44
HS1BP3Q53T59 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC24.06■■□□□ 1.44
HS1BP3Q53T59 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC24.06■■□□□ 1.44
HS1BP3Q53T59 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
HS1BP3Q53T59 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
HS1BP3Q53T59 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC24.06■■□□□ 1.44
HS1BP3Q53T59 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
HS1BP3Q53T59 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
HS1BP3Q53T59 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC24.05■■□□□ 1.44
HS1BP3Q53T59 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
HS1BP3Q53T59 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
HS1BP3Q53T59 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
HS1BP3Q53T59 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
HS1BP3Q53T59 SPCS2P3-201ENST00000500401 656 ntBASIC24.05■■□□□ 1.44
HS1BP3Q53T59 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC24.05■■□□□ 1.44
HS1BP3Q53T59 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC24.05■■□□□ 1.44
HS1BP3Q53T59 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
HS1BP3Q53T59 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC24.05■■□□□ 1.44
HS1BP3Q53T59 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC24.04■■□□□ 1.44
HS1BP3Q53T59 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
HS1BP3Q53T59 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms