Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.44■□□□□ 0.7
LSM3P62310 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LSM3P62310 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LSM3P62310 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.44■□□□□ 0.7
LSM3P62310 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LSM3P62310 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LSM3P62310 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LSM3P62310 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.43■□□□□ 0.7
LSM3P62310 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LSM3P62310 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
LSM3P62310 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.43■□□□□ 0.7
LSM3P62310 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LSM3P62310 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.43■□□□□ 0.7
LSM3P62310 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.43■□□□□ 0.7
LSM3P62310 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LSM3P62310 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LSM3P62310 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LSM3P62310 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LSM3P62310 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LSM3P62310 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
LSM3P62310 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LSM3P62310 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
LSM3P62310 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
LSM3P62310 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.42■□□□□ 0.7
LSM3P62310 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
LSM3P62310 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.42■□□□□ 0.7
LSM3P62310 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
LSM3P62310 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LSM3P62310 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.42■□□□□ 0.7
LSM3P62310 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
LSM3P62310 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LSM3P62310 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LSM3P62310 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.42■□□□□ 0.7
LSM3P62310 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
LSM3P62310 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LSM3P62310 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LSM3P62310 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LSM3P62310 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.41■□□□□ 0.7
LSM3P62310 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.41■□□□□ 0.7
LSM3P62310 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
LSM3P62310 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.41■□□□□ 0.7
LSM3P62310 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC19.41■□□□□ 0.7
LSM3P62310 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LSM3P62310 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.41■□□□□ 0.7
LSM3P62310 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LSM3P62310 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LSM3P62310 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.41■□□□□ 0.7
LSM3P62310 PCDHAC2-203ENST00000615316 3011 ntBASIC19.41■□□□□ 0.7
LSM3P62310 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LSM3P62310 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
LSM3P62310 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LSM3P62310 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LSM3P62310 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.4■□□□□ 0.7
LSM3P62310 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.4■□□□□ 0.7
LSM3P62310 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.4■□□□□ 0.7
LSM3P62310 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC19.4■□□□□ 0.7
LSM3P62310 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LSM3P62310 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.4■□□□□ 0.7
LSM3P62310 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
LSM3P62310 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LSM3P62310 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.4■□□□□ 0.7
LSM3P62310 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
LSM3P62310 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.39■□□□□ 0.7
LSM3P62310 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.39■□□□□ 0.7
LSM3P62310 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
LSM3P62310 LINC01960-201ENST00000563759 1884 ntBASIC19.39■□□□□ 0.7
LSM3P62310 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LSM3P62310 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
LSM3P62310 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LSM3P62310 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LSM3P62310 AC016575.1-201ENST00000607026 382 ntBASIC19.39■□□□□ 0.69
LSM3P62310 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LSM3P62310 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
LSM3P62310 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.39■□□□□ 0.69
LSM3P62310 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LSM3P62310 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LSM3P62310 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LSM3P62310 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
LSM3P62310 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
LSM3P62310 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
LSM3P62310 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
LSM3P62310 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LSM3P62310 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
LSM3P62310 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LSM3P62310 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
LSM3P62310 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LSM3P62310 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
LSM3P62310 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
LSM3P62310 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
LSM3P62310 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LSM3P62310 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
LSM3P62310 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
LSM3P62310 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LSM3P62310 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LSM3P62310 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LSM3P62310 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
LSM3P62310 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
LSM3P62310 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.38■□□□□ 0.69
LSM3P62310 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.38■□□□□ 0.69
LSM3P62310 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms