Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
MMP11P24347 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.53■□□□□ 0.88
MMP11P24347 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MMP11P24347 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
MMP11P24347 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.52■□□□□ 0.88
MMP11P24347 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
MMP11P24347 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.52■□□□□ 0.88
MMP11P24347 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.52■□□□□ 0.88
MMP11P24347 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
MMP11P24347 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.52■□□□□ 0.88
MMP11P24347 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
MMP11P24347 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MMP11P24347 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.52■□□□□ 0.87
MMP11P24347 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.52■□□□□ 0.87
MMP11P24347 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.51■□□□□ 0.87
MMP11P24347 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
MMP11P24347 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.51■□□□□ 0.87
MMP11P24347 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MMP11P24347 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.51■□□□□ 0.87
MMP11P24347 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.51■□□□□ 0.87
MMP11P24347 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.51■□□□□ 0.87
MMP11P24347 TERF1P2-201ENST00000583350 1212 ntBASIC20.51■□□□□ 0.87
MMP11P24347 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.51■□□□□ 0.87
MMP11P24347 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MMP11P24347 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MMP11P24347 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
MMP11P24347 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MMP11P24347 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MMP11P24347 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MMP11P24347 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
MMP11P24347 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.5■□□□□ 0.87
MMP11P24347 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
MMP11P24347 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
MMP11P24347 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MMP11P24347 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
MMP11P24347 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.5■□□□□ 0.87
MMP11P24347 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
MMP11P24347 KRT18P14-201ENST00000534205 1250 ntBASIC20.5■□□□□ 0.87
MMP11P24347 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
MMP11P24347 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
MMP11P24347 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MMP11P24347 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MMP11P24347 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MMP11P24347 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
MMP11P24347 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MMP11P24347 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MMP11P24347 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.49■□□□□ 0.87
MMP11P24347 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.49■□□□□ 0.87
MMP11P24347 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
MMP11P24347 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
MMP11P24347 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
MMP11P24347 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
MMP11P24347 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
MMP11P24347 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
MMP11P24347 AC010141.3-201ENST00000456659 717 ntBASIC20.49■□□□□ 0.87
MMP11P24347 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
MMP11P24347 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MMP11P24347 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
MMP11P24347 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MMP11P24347 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MMP11P24347 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
MMP11P24347 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.49■□□□□ 0.87
MMP11P24347 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MMP11P24347 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.48■□□□□ 0.87
MMP11P24347 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MMP11P24347 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.48■□□□□ 0.87
MMP11P24347 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MMP11P24347 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.48■□□□□ 0.87
MMP11P24347 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MMP11P24347 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.48■□□□□ 0.87
MMP11P24347 AC022517.1-201ENST00000592429 346 ntBASIC20.48■□□□□ 0.87
MMP11P24347 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.48■□□□□ 0.87
MMP11P24347 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.48■□□□□ 0.87
MMP11P24347 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
MMP11P24347 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.48■□□□□ 0.87
MMP11P24347 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
MMP11P24347 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.48■□□□□ 0.87
MMP11P24347 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
MMP11P24347 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
MMP11P24347 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
MMP11P24347 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
MMP11P24347 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.47■□□□□ 0.87
MMP11P24347 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
MMP11P24347 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
MMP11P24347 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
MMP11P24347 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
MMP11P24347 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
MMP11P24347 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.47■□□□□ 0.87
MMP11P24347 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.47■□□□□ 0.87
MMP11P24347 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
MMP11P24347 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
MMP11P24347 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.47■□□□□ 0.87
MMP11P24347 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.47■□□□□ 0.87
MMP11P24347 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
MMP11P24347 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MMP11P24347 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
MMP11P24347 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.46■□□□□ 0.87
MMP11P24347 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MMP11P24347 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MMP11P24347 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms