Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SCAF4O95104 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC17.59■□□□□ 0.41
SCAF4O95104 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.59■□□□□ 0.41
SCAF4O95104 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC17.59■□□□□ 0.41
SCAF4O95104 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SCAF4O95104 MIR4281-201ENST00000580852 62 ntBASIC17.59■□□□□ 0.41
SCAF4O95104 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC17.59■□□□□ 0.41
SCAF4O95104 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.59■□□□□ 0.41
SCAF4O95104 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SCAF4O95104 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.59■□□□□ 0.41
SCAF4O95104 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC17.59■□□□□ 0.41
SCAF4O95104 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SCAF4O95104 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SCAF4O95104 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC17.59■□□□□ 0.41
SCAF4O95104 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
SCAF4O95104 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SCAF4O95104 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.58■□□□□ 0.41
SCAF4O95104 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SCAF4O95104 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
SCAF4O95104 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SCAF4O95104 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SCAF4O95104 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SCAF4O95104 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SCAF4O95104 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SCAF4O95104 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC17.58■□□□□ 0.4
SCAF4O95104 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC17.58■□□□□ 0.4
SCAF4O95104 AL035685.1-201ENST00000636663 812 ntBASIC17.58■□□□□ 0.4
SCAF4O95104 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SCAF4O95104 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
SCAF4O95104 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
SCAF4O95104 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SCAF4O95104 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SCAF4O95104 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SCAF4O95104 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SCAF4O95104 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SCAF4O95104 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SCAF4O95104 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SCAF4O95104 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
SCAF4O95104 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.57■□□□□ 0.4
SCAF4O95104 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCAF4O95104 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SCAF4O95104 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCAF4O95104 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SCAF4O95104 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SCAF4O95104 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SCAF4O95104 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SCAF4O95104 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCAF4O95104 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
SCAF4O95104 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
SCAF4O95104 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
SCAF4O95104 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCAF4O95104 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCAF4O95104 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCAF4O95104 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC17.56■□□□□ 0.4
SCAF4O95104 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCAF4O95104 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCAF4O95104 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCAF4O95104 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SCAF4O95104 BX664725.1-201ENST00000438252 379 ntBASIC17.56■□□□□ 0.4
SCAF4O95104 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCAF4O95104 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC17.56■□□□□ 0.4
SCAF4O95104 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCAF4O95104 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCAF4O95104 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SCAF4O95104 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCAF4O95104 AF131216.4-201ENST00000638924 1588 ntBASIC17.56■□□□□ 0.4
SCAF4O95104 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCAF4O95104 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SCAF4O95104 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCAF4O95104 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC17.56■□□□□ 0.4
SCAF4O95104 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCAF4O95104 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.56■□□□□ 0.4
SCAF4O95104 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.56■□□□□ 0.4
SCAF4O95104 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
SCAF4O95104 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC17.56■□□□□ 0.4
SCAF4O95104 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SCAF4O95104 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SCAF4O95104 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SCAF4O95104 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SCAF4O95104 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
SCAF4O95104 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SCAF4O95104 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SCAF4O95104 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SCAF4O95104 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SCAF4O95104 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SCAF4O95104 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SCAF4O95104 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SCAF4O95104 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SCAF4O95104 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SCAF4O95104 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SCAF4O95104 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
SCAF4O95104 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.55■□□□□ 0.4
SCAF4O95104 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
SCAF4O95104 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
SCAF4O95104 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.55■□□□□ 0.4
SCAF4O95104 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SCAF4O95104 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SCAF4O95104 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
SCAF4O95104 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SCAF4O95104 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms