Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 AC010525.1-201ENST00000585559 441 ntBASIC18.75■□□□□ 0.59
XRCC2O43543 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
XRCC2O43543 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
XRCC2O43543 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
XRCC2O43543 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
XRCC2O43543 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
XRCC2O43543 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.74■□□□□ 0.59
XRCC2O43543 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
XRCC2O43543 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
XRCC2O43543 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
XRCC2O43543 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
XRCC2O43543 AC008406.3-201ENST00000620001 1374 ntBASIC18.74■□□□□ 0.59
XRCC2O43543 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
XRCC2O43543 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
XRCC2O43543 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.74■□□□□ 0.59
XRCC2O43543 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
XRCC2O43543 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.74■□□□□ 0.59
XRCC2O43543 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.74■□□□□ 0.59
XRCC2O43543 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.74■□□□□ 0.59
XRCC2O43543 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
XRCC2O43543 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
XRCC2O43543 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
XRCC2O43543 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
XRCC2O43543 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.74■□□□□ 0.59
XRCC2O43543 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
XRCC2O43543 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
XRCC2O43543 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
XRCC2O43543 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
XRCC2O43543 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
XRCC2O43543 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
XRCC2O43543 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
XRCC2O43543 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
XRCC2O43543 AP005435.1-201ENST00000529293 1178 ntBASIC18.73■□□□□ 0.59
XRCC2O43543 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
XRCC2O43543 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.73■□□□□ 0.59
XRCC2O43543 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
XRCC2O43543 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
XRCC2O43543 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
XRCC2O43543 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
XRCC2O43543 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.73■□□□□ 0.59
XRCC2O43543 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
XRCC2O43543 OR7E47P-201ENST00000546390 1422 ntBASIC18.73■□□□□ 0.59
XRCC2O43543 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
XRCC2O43543 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
XRCC2O43543 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
XRCC2O43543 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
XRCC2O43543 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
XRCC2O43543 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
XRCC2O43543 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
XRCC2O43543 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
XRCC2O43543 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
XRCC2O43543 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
XRCC2O43543 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
XRCC2O43543 UNC93B3-201ENST00000308076 687 ntBASIC18.72■□□□□ 0.59
XRCC2O43543 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
XRCC2O43543 SLC47A1P1-202ENST00000449666 945 ntBASIC18.72■□□□□ 0.59
XRCC2O43543 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.72■□□□□ 0.59
XRCC2O43543 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
XRCC2O43543 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
XRCC2O43543 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.72■□□□□ 0.59
XRCC2O43543 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
XRCC2O43543 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
XRCC2O43543 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
XRCC2O43543 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
XRCC2O43543 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
XRCC2O43543 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
XRCC2O43543 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
XRCC2O43543 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
XRCC2O43543 OXCT2P1-201ENST00000447263 1535 ntBASIC18.71■□□□□ 0.59
XRCC2O43543 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
XRCC2O43543 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
XRCC2O43543 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
XRCC2O43543 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
XRCC2O43543 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.71■□□□□ 0.59
XRCC2O43543 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
XRCC2O43543 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
XRCC2O43543 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.71■□□□□ 0.59
XRCC2O43543 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.71■□□□□ 0.59
XRCC2O43543 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.71■□□□□ 0.59
XRCC2O43543 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.71■□□□□ 0.59
XRCC2O43543 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
XRCC2O43543 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.71■□□□□ 0.59
XRCC2O43543 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
XRCC2O43543 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
XRCC2O43543 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
XRCC2O43543 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.71■□□□□ 0.59
XRCC2O43543 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
XRCC2O43543 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
XRCC2O43543 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
XRCC2O43543 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
XRCC2O43543 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.7■□□□□ 0.58
XRCC2O43543 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.7■□□□□ 0.58
XRCC2O43543 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
XRCC2O43543 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
XRCC2O43543 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
XRCC2O43543 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
XRCC2O43543 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
XRCC2O43543 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.7■□□□□ 0.58
XRCC2O43543 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
XRCC2O43543 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms