Protein–RNA interactions for Protein: O00453

LST1, Leukocyte-specific transcript 1 protein, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LST1O00453 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LST1O00453 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
LST1O00453 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
LST1O00453 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC14.06□□□□□ -0.16
LST1O00453 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LST1O00453 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
LST1O00453 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LST1O00453 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC14.06□□□□□ -0.16
LST1O00453 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC14.06□□□□□ -0.16
LST1O00453 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
LST1O00453 AFG3L1P-217ENST00000557444 2447 ntBASIC14.06□□□□□ -0.16
LST1O00453 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
LST1O00453 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
LST1O00453 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC14.06□□□□□ -0.16
LST1O00453 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LST1O00453 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LST1O00453 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LST1O00453 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC14.06□□□□□ -0.16
LST1O00453 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
LST1O00453 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
LST1O00453 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC14.05□□□□□ -0.16
LST1O00453 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LST1O00453 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC14.05□□□□□ -0.16
LST1O00453 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
LST1O00453 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LST1O00453 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LST1O00453 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LST1O00453 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LST1O00453 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LST1O00453 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LST1O00453 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LST1O00453 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC14.04□□□□□ -0.16
LST1O00453 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LST1O00453 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LST1O00453 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC14.04□□□□□ -0.16
LST1O00453 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
LST1O00453 DUX4L29-201ENST00000425409 679 ntBASIC14.04□□□□□ -0.16
LST1O00453 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LST1O00453 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC14.04□□□□□ -0.16
LST1O00453 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LST1O00453 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LST1O00453 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LST1O00453 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LST1O00453 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LST1O00453 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
LST1O00453 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LST1O00453 AL353803.4-201ENST00000565882 1934 ntBASIC14.03□□□□□ -0.16
LST1O00453 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC14.03□□□□□ -0.16
LST1O00453 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LST1O00453 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
LST1O00453 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
LST1O00453 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
LST1O00453 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LST1O00453 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LST1O00453 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LST1O00453 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
LST1O00453 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC14.03□□□□□ -0.16
LST1O00453 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LST1O00453 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LST1O00453 BX323043.1-201ENST00000641006 1765 ntBASIC14.03□□□□□ -0.16
LST1O00453 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LST1O00453 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
LST1O00453 AC018445.3-201ENST00000624177 1945 ntBASIC14.03□□□□□ -0.16
LST1O00453 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LST1O00453 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LST1O00453 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LST1O00453 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
LST1O00453 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
LST1O00453 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LST1O00453 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LST1O00453 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC14.02□□□□□ -0.16
LST1O00453 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
LST1O00453 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LST1O00453 GABARAPL3-202ENST00000624044 1851 ntBASIC14.02□□□□□ -0.16
LST1O00453 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
LST1O00453 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LST1O00453 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
LST1O00453 AL022069.1-201ENST00000568025 1636 ntBASIC14.02□□□□□ -0.16
LST1O00453 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LST1O00453 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LST1O00453 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LST1O00453 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LST1O00453 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
LST1O00453 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
LST1O00453 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC14.02□□□□□ -0.17
LST1O00453 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC14.02□□□□□ -0.17
LST1O00453 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
LST1O00453 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LST1O00453 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
LST1O00453 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LST1O00453 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LST1O00453 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LST1O00453 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
LST1O00453 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LST1O00453 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC14.02□□□□□ -0.17
LST1O00453 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
LST1O00453 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
LST1O00453 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
LST1O00453 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC14.01□□□□□ -0.17
LST1O00453 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms