Protein–RNA interactions for Protein: Q9H267

VPS33B, Vacuolar protein sorting-associated protein 33B, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33BQ9H267 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC33.7■■■□□ 2.99
VPS33BQ9H267 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC33.69■■■□□ 2.98
VPS33BQ9H267 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC33.69■■■□□ 2.98
VPS33BQ9H267 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC33.67■■■□□ 2.98
VPS33BQ9H267 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC33.65■■■□□ 2.98
VPS33BQ9H267 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC33.65■■■□□ 2.98
VPS33BQ9H267 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC33.65■■■□□ 2.98
VPS33BQ9H267 HGH1-207ENST00000628266 258 ntTSL 5 BASIC33.65■■■□□ 2.98
VPS33BQ9H267 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.98
VPS33BQ9H267 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.98
VPS33BQ9H267 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC33.64■■■□□ 2.98
VPS33BQ9H267 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC33.62■■■□□ 2.97
VPS33BQ9H267 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC33.62■■■□□ 2.97
VPS33BQ9H267 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC33.61■■■□□ 2.97
VPS33BQ9H267 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC33.6■■■□□ 2.97
VPS33BQ9H267 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC33.58■■■□□ 2.97
VPS33BQ9H267 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC33.58■■■□□ 2.97
VPS33BQ9H267 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC33.58■■■□□ 2.97
VPS33BQ9H267 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC33.58■■■□□ 2.97
VPS33BQ9H267 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC33.58■■■□□ 2.97
VPS33BQ9H267 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC33.56■■■□□ 2.96
VPS33BQ9H267 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
VPS33BQ9H267 RPS2-209ENST00000529806 993 ntTSL 3 BASIC33.56■■■□□ 2.96
VPS33BQ9H267 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC33.55■■■□□ 2.96
VPS33BQ9H267 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC33.55■■■□□ 2.96
VPS33BQ9H267 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC33.54■■■□□ 2.96
VPS33BQ9H267 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC33.5■■■□□ 2.95
VPS33BQ9H267 DUX4L29-201ENST00000425409 679 ntBASIC33.5■■■□□ 2.95
VPS33BQ9H267 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC33.49■■■□□ 2.95
VPS33BQ9H267 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC33.49■■■□□ 2.95
VPS33BQ9H267 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC33.47■■■□□ 2.95
VPS33BQ9H267 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC33.46■■■□□ 2.95
VPS33BQ9H267 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC33.46■■■□□ 2.95
VPS33BQ9H267 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.95
VPS33BQ9H267 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC33.44■■■□□ 2.94
VPS33BQ9H267 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC33.43■■■□□ 2.94
VPS33BQ9H267 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC33.41■■■□□ 2.94
VPS33BQ9H267 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
VPS33BQ9H267 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC33.4■■■□□ 2.94
VPS33BQ9H267 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC33.4■■■□□ 2.94
VPS33BQ9H267 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
VPS33BQ9H267 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC33.4■■■□□ 2.94
VPS33BQ9H267 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC33.4■■■□□ 2.94
VPS33BQ9H267 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC33.4■■■□□ 2.94
VPS33BQ9H267 MIR4449-201ENST00000578365 66 ntBASIC33.39■■■□□ 2.94
VPS33BQ9H267 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC33.39■■■□□ 2.94
VPS33BQ9H267 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC33.37■■■□□ 2.93
VPS33BQ9H267 MACF1-219ENST00000484793 834 ntTSL 2 BASIC33.37■■■□□ 2.93
VPS33BQ9H267 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC33.36■■■□□ 2.93
VPS33BQ9H267 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
VPS33BQ9H267 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC33.35■■■□□ 2.93
VPS33BQ9H267 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
VPS33BQ9H267 MIR639-201ENST00000384974 98 ntBASIC33.34■■■□□ 2.93
VPS33BQ9H267 RPS2-202ENST00000526522 924 ntTSL 2 BASIC33.33■■■□□ 2.93
VPS33BQ9H267 AC021231.2-201ENST00000594613 730 ntBASIC33.32■■■□□ 2.92
VPS33BQ9H267 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC33.3■■■□□ 2.92
VPS33BQ9H267 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
VPS33BQ9H267 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC33.29■■■□□ 2.92
VPS33BQ9H267 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC33.29■■■□□ 2.92
VPS33BQ9H267 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC33.28■■■□□ 2.92
VPS33BQ9H267 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC33.27■■■□□ 2.92
VPS33BQ9H267 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC33.27■■■□□ 2.92
VPS33BQ9H267 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.91
VPS33BQ9H267 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC33.25■■■□□ 2.91
VPS33BQ9H267 CIB2-204ENST00000557846 934 ntTSL 3 BASIC33.24■■■□□ 2.91
VPS33BQ9H267 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC33.23■■■□□ 2.91
VPS33BQ9H267 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC33.22■■■□□ 2.91
VPS33BQ9H267 AC108673.1-201ENST00000510422 1159 ntBASIC33.22■■■□□ 2.91
VPS33BQ9H267 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC33.21■■■□□ 2.91
VPS33BQ9H267 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
VPS33BQ9H267 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
VPS33BQ9H267 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC33.18■■■□□ 2.9
VPS33BQ9H267 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC33.17■■■□□ 2.9
VPS33BQ9H267 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
VPS33BQ9H267 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC33.17■■■□□ 2.9
VPS33BQ9H267 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
VPS33BQ9H267 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC33.15■■■□□ 2.9
VPS33BQ9H267 MIR3648-2-201ENST00000581792 180 ntBASIC33.15■■■□□ 2.9
VPS33BQ9H267 MIR3648-1-201ENST00000615959 180 ntBASIC33.15■■■□□ 2.9
VPS33BQ9H267 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC33.15■■■□□ 2.9
VPS33BQ9H267 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC33.14■■■□□ 2.9
VPS33BQ9H267 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
VPS33BQ9H267 RNF166-209ENST00000567844 633 ntTSL 5 BASIC33.12■■■□□ 2.89
VPS33BQ9H267 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC33.12■■■□□ 2.89
VPS33BQ9H267 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC33.11■■■□□ 2.89
VPS33BQ9H267 AGPS-202ENST00000409888 815 ntTSL 4 BASIC33.1■■■□□ 2.89
VPS33BQ9H267 MIR6090-201ENST00000622481 60 ntBASIC33.1■■■□□ 2.89
VPS33BQ9H267 GDI1-215ENST00000630693 786 ntTSL 4 BASIC33.1■■■□□ 2.89
VPS33BQ9H267 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
VPS33BQ9H267 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
VPS33BQ9H267 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
VPS33BQ9H267 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
VPS33BQ9H267 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC33.09■■■□□ 2.89
VPS33BQ9H267 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
VPS33BQ9H267 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC33.08■■■□□ 2.89
VPS33BQ9H267 CALM3-209ENST00000597743 577 ntTSL 4 BASIC33.08■■■□□ 2.89
VPS33BQ9H267 AC016575.1-201ENST00000607026 382 ntBASIC33.08■■■□□ 2.89
VPS33BQ9H267 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC33.07■■■□□ 2.88
VPS33BQ9H267 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
VPS33BQ9H267 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC33.06■■■□□ 2.88
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms