Protein–RNA interactions for Protein: Q99988

GDF15, Growth/differentiation factor 15, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF15Q99988 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC30.56■■■□□ 2.48
GDF15Q99988 DUX4L29-201ENST00000425409 679 ntBASIC30.55■■■□□ 2.48
GDF15Q99988 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC30.54■■■□□ 2.48
GDF15Q99988 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC30.53■■■□□ 2.48
GDF15Q99988 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
GDF15Q99988 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC30.52■■■□□ 2.48
GDF15Q99988 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
GDF15Q99988 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
GDF15Q99988 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC30.48■■■□□ 2.47
GDF15Q99988 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
GDF15Q99988 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
GDF15Q99988 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC30.44■■■□□ 2.46
GDF15Q99988 MIR3648-2-201ENST00000581792 180 ntBASIC30.43■■■□□ 2.46
GDF15Q99988 MIR3648-1-201ENST00000615959 180 ntBASIC30.43■■■□□ 2.46
GDF15Q99988 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
GDF15Q99988 AC016575.1-201ENST00000607026 382 ntBASIC30.42■■■□□ 2.46
GDF15Q99988 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
GDF15Q99988 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC30.4■■■□□ 2.46
GDF15Q99988 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC30.38■■■□□ 2.45
GDF15Q99988 GDI1-215ENST00000630693 786 ntTSL 4 BASIC30.38■■■□□ 2.45
GDF15Q99988 RNF166-209ENST00000567844 633 ntTSL 5 BASIC30.37■■■□□ 2.45
GDF15Q99988 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC30.37■■■□□ 2.45
GDF15Q99988 AC021231.2-201ENST00000594613 730 ntBASIC30.36■■■□□ 2.45
GDF15Q99988 ABHD17AP3-201ENST00000503096 1137 ntBASIC30.33■■■□□ 2.45
GDF15Q99988 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
GDF15Q99988 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
GDF15Q99988 RPS2-209ENST00000529806 993 ntTSL 3 BASIC30.31■■■□□ 2.44
GDF15Q99988 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
GDF15Q99988 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC30.3■■■□□ 2.44
GDF15Q99988 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
GDF15Q99988 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC30.28■■■□□ 2.44
GDF15Q99988 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC30.26■■■□□ 2.43
GDF15Q99988 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC30.26■■■□□ 2.43
GDF15Q99988 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC30.24■■■□□ 2.43
GDF15Q99988 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
GDF15Q99988 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC30.23■■■□□ 2.43
GDF15Q99988 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
GDF15Q99988 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
GDF15Q99988 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC30.22■■■□□ 2.43
GDF15Q99988 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
GDF15Q99988 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC30.21■■■□□ 2.43
GDF15Q99988 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC30.2■■■□□ 2.43
GDF15Q99988 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC30.2■■■□□ 2.43
GDF15Q99988 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
GDF15Q99988 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
GDF15Q99988 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
GDF15Q99988 CR559946.2-201ENST00000623684 991 ntBASIC30.19■■■□□ 2.42
GDF15Q99988 AGPS-202ENST00000409888 815 ntTSL 4 BASIC30.17■■■□□ 2.42
GDF15Q99988 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
GDF15Q99988 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC30.16■■■□□ 2.42
GDF15Q99988 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC30.16■■■□□ 2.42
GDF15Q99988 CIB2-204ENST00000557846 934 ntTSL 3 BASIC30.14■■■□□ 2.42
GDF15Q99988 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
GDF15Q99988 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
GDF15Q99988 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC30.12■■■□□ 2.41
GDF15Q99988 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
GDF15Q99988 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC30.12■■■□□ 2.41
GDF15Q99988 DUX4L11-201ENST00000611504 1267 ntBASIC30.12■■■□□ 2.41
GDF15Q99988 DUX4L12-201ENST00000614593 1267 ntBASIC30.12■■■□□ 2.41
GDF15Q99988 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC30.12■■■□□ 2.41
GDF15Q99988 DUX4L14-201ENST00000621227 1267 ntBASIC30.12■■■□□ 2.41
GDF15Q99988 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
GDF15Q99988 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC30.11■■■□□ 2.41
GDF15Q99988 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
GDF15Q99988 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC30.1■■■□□ 2.41
GDF15Q99988 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
GDF15Q99988 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
GDF15Q99988 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
GDF15Q99988 WASH5P-204ENST00000632292 975 ntBASIC30.08■■■□□ 2.41
GDF15Q99988 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
GDF15Q99988 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC30.06■■■□□ 2.4
GDF15Q99988 LINC01971-201ENST00000617888 1048 ntBASIC30.05■■■□□ 2.4
GDF15Q99988 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC30.03■■■□□ 2.4
GDF15Q99988 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
GDF15Q99988 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC30.02■■■□□ 2.4
GDF15Q99988 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC30.01■■■□□ 2.39
GDF15Q99988 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
GDF15Q99988 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
GDF15Q99988 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
GDF15Q99988 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC30■■■□□ 2.39
GDF15Q99988 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
GDF15Q99988 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC29.98■■■□□ 2.39
GDF15Q99988 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC29.98■■■□□ 2.39
GDF15Q99988 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC29.97■■■□□ 2.39
GDF15Q99988 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC29.97■■■□□ 2.39
GDF15Q99988 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC29.96■■■□□ 2.39
GDF15Q99988 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
GDF15Q99988 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
GDF15Q99988 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC29.95■■■□□ 2.39
GDF15Q99988 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC29.95■■■□□ 2.38
GDF15Q99988 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC29.95■■■□□ 2.38
GDF15Q99988 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC29.94■■■□□ 2.38
GDF15Q99988 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
GDF15Q99988 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC29.94■■■□□ 2.38
GDF15Q99988 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC29.94■■■□□ 2.38
GDF15Q99988 MIR6090-201ENST00000622481 60 ntBASIC29.92■■■□□ 2.38
GDF15Q99988 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
GDF15Q99988 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
GDF15Q99988 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
GDF15Q99988 AC108673.1-201ENST00000510422 1159 ntBASIC29.9■■■□□ 2.38
Retrieved 100 of 98,524 protein–RNA pairs in 8.3 ms