Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SLC47A1Q96FL8 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
SLC47A1Q96FL8 SHF-206ENST00000560471 2499 ntTSL 5 BASIC25.51■■□□□ 1.67
SLC47A1Q96FL8 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC25.51■■□□□ 1.67
SLC47A1Q96FL8 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC25.51■■□□□ 1.67
SLC47A1Q96FL8 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC25.5■■□□□ 1.67
SLC47A1Q96FL8 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
SLC47A1Q96FL8 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SLC47A1Q96FL8 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC25.49■■□□□ 1.67
SLC47A1Q96FL8 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SLC47A1Q96FL8 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SLC47A1Q96FL8 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
SLC47A1Q96FL8 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
SLC47A1Q96FL8 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SLC47A1Q96FL8 MVK-208ENST00000539696 608 ntTSL 5 BASIC25.43■■□□□ 1.66
SLC47A1Q96FL8 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC25.43■■□□□ 1.66
SLC47A1Q96FL8 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
SLC47A1Q96FL8 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
SLC47A1Q96FL8 AC139426.1-201ENST00000568218 2529 ntBASIC25.41■■□□□ 1.66
SLC47A1Q96FL8 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
SLC47A1Q96FL8 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
SLC47A1Q96FL8 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SLC47A1Q96FL8 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.66
SLC47A1Q96FL8 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC25.39■■□□□ 1.66
SLC47A1Q96FL8 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC25.39■■□□□ 1.66
SLC47A1Q96FL8 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SLC47A1Q96FL8 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
SLC47A1Q96FL8 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
SLC47A1Q96FL8 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SLC47A1Q96FL8 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
SLC47A1Q96FL8 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SLC47A1Q96FL8 DYNLL1-208ENST00000550178 581 ntBASIC25.35■■□□□ 1.65
SLC47A1Q96FL8 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
SLC47A1Q96FL8 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC25.35■■□□□ 1.65
SLC47A1Q96FL8 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
SLC47A1Q96FL8 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
SLC47A1Q96FL8 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
SLC47A1Q96FL8 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
SLC47A1Q96FL8 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC25.33■■□□□ 1.64
SLC47A1Q96FL8 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
SLC47A1Q96FL8 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SLC47A1Q96FL8 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SLC47A1Q96FL8 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SLC47A1Q96FL8 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SLC47A1Q96FL8 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
SLC47A1Q96FL8 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SLC47A1Q96FL8 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SLC47A1Q96FL8 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
SLC47A1Q96FL8 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC25.27■■□□□ 1.64
SLC47A1Q96FL8 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
SLC47A1Q96FL8 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
SLC47A1Q96FL8 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
SLC47A1Q96FL8 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
SLC47A1Q96FL8 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
SLC47A1Q96FL8 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SLC47A1Q96FL8 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC25.24■■□□□ 1.63
SLC47A1Q96FL8 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC25.24■■□□□ 1.63
SLC47A1Q96FL8 AP002365.1-201ENST00000603448 772 ntBASIC25.23■■□□□ 1.63
SLC47A1Q96FL8 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC25.22■■□□□ 1.63
SLC47A1Q96FL8 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC25.22■■□□□ 1.63
SLC47A1Q96FL8 EBPL-203ENST00000378270 579 ntTSL 2 BASIC25.21■■□□□ 1.63
SLC47A1Q96FL8 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC25.21■■□□□ 1.63
SLC47A1Q96FL8 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC25.21■■□□□ 1.63
SLC47A1Q96FL8 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
SLC47A1Q96FL8 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.63
SLC47A1Q96FL8 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.62
SLC47A1Q96FL8 ST7-AS1-201ENST00000456775 1889 ntBASIC25.19■■□□□ 1.62
SLC47A1Q96FL8 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SLC47A1Q96FL8 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
SLC47A1Q96FL8 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SLC47A1Q96FL8 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
SLC47A1Q96FL8 AL031258.1-201ENST00000623562 325 ntBASIC25.18■■□□□ 1.62
SLC47A1Q96FL8 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
SLC47A1Q96FL8 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC25.17■■□□□ 1.62
SLC47A1Q96FL8 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC25.16■■□□□ 1.62
SLC47A1Q96FL8 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
SLC47A1Q96FL8 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC25.16■■□□□ 1.62
SLC47A1Q96FL8 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SLC47A1Q96FL8 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SLC47A1Q96FL8 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SLC47A1Q96FL8 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC25.14■■□□□ 1.62
SLC47A1Q96FL8 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
SLC47A1Q96FL8 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
SLC47A1Q96FL8 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC25.13■■□□□ 1.61
SLC47A1Q96FL8 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SLC47A1Q96FL8 AL161658.1-201ENST00000623641 1967 ntBASIC25.11■■□□□ 1.61
SLC47A1Q96FL8 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SLC47A1Q96FL8 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
SLC47A1Q96FL8 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SLC47A1Q96FL8 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
SLC47A1Q96FL8 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
SLC47A1Q96FL8 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
SLC47A1Q96FL8 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
SLC47A1Q96FL8 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
SLC47A1Q96FL8 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC25.06■■□□□ 1.6
SLC47A1Q96FL8 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
SLC47A1Q96FL8 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC25.06■■□□□ 1.6
SLC47A1Q96FL8 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SLC47A1Q96FL8 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
SLC47A1Q96FL8 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms