Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
ATPAF2Q8N5M1 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
ATPAF2Q8N5M1 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC27.8■■■□□ 2.04
ATPAF2Q8N5M1 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC27.8■■■□□ 2.04
ATPAF2Q8N5M1 ST7-205ENST00000393446 2114 ntTSL 5 BASIC27.79■■■□□ 2.04
ATPAF2Q8N5M1 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
ATPAF2Q8N5M1 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC27.77■■■□□ 2.04
ATPAF2Q8N5M1 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
ATPAF2Q8N5M1 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
ATPAF2Q8N5M1 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
ATPAF2Q8N5M1 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC27.74■■■□□ 2.03
ATPAF2Q8N5M1 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
ATPAF2Q8N5M1 WASH5P-204ENST00000632292 975 ntBASIC27.73■■■□□ 2.03
ATPAF2Q8N5M1 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
ATPAF2Q8N5M1 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC27.72■■■□□ 2.03
ATPAF2Q8N5M1 AC097358.2-201ENST00000607541 1159 ntBASIC27.72■■■□□ 2.03
ATPAF2Q8N5M1 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC27.71■■■□□ 2.03
ATPAF2Q8N5M1 AC136428.2-201ENST00000563187 214 ntBASIC27.71■■■□□ 2.03
ATPAF2Q8N5M1 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC27.7■■■□□ 2.03
ATPAF2Q8N5M1 ST7-202ENST00000323984 2142 ntTSL 5 BASIC27.7■■■□□ 2.03
ATPAF2Q8N5M1 ST7-207ENST00000393449 2127 ntTSL 5 BASIC27.7■■■□□ 2.03
ATPAF2Q8N5M1 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC27.7■■■□□ 2.02
ATPAF2Q8N5M1 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC27.69■■■□□ 2.02
ATPAF2Q8N5M1 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
ATPAF2Q8N5M1 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
ATPAF2Q8N5M1 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
ATPAF2Q8N5M1 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC27.67■■■□□ 2.02
ATPAF2Q8N5M1 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
ATPAF2Q8N5M1 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
ATPAF2Q8N5M1 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
ATPAF2Q8N5M1 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC27.64■■■□□ 2.02
ATPAF2Q8N5M1 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
ATPAF2Q8N5M1 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC27.64■■■□□ 2.02
ATPAF2Q8N5M1 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC27.64■■■□□ 2.01
ATPAF2Q8N5M1 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
ATPAF2Q8N5M1 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC27.63■■■□□ 2.01
ATPAF2Q8N5M1 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC27.63■■■□□ 2.01
ATPAF2Q8N5M1 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC27.62■■■□□ 2.01
ATPAF2Q8N5M1 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
ATPAF2Q8N5M1 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
ATPAF2Q8N5M1 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC27.61■■■□□ 2.01
ATPAF2Q8N5M1 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
ATPAF2Q8N5M1 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC27.61■■■□□ 2.01
ATPAF2Q8N5M1 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC27.61■■■□□ 2.01
ATPAF2Q8N5M1 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC27.61■■■□□ 2.01
ATPAF2Q8N5M1 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC27.59■■■□□ 2.01
ATPAF2Q8N5M1 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
ATPAF2Q8N5M1 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC27.59■■■□□ 2.01
ATPAF2Q8N5M1 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
ATPAF2Q8N5M1 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
ATPAF2Q8N5M1 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC27.58■■■□□ 2.01
ATPAF2Q8N5M1 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
ATPAF2Q8N5M1 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC27.58■■■□□ 2.01
ATPAF2Q8N5M1 AL391121.1-201ENST00000607967 1349 ntBASIC27.57■■■□□ 2
ATPAF2Q8N5M1 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
ATPAF2Q8N5M1 AL161658.1-201ENST00000623641 1967 ntBASIC27.56■■■□□ 2
ATPAF2Q8N5M1 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC27.55■■■□□ 2
ATPAF2Q8N5M1 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC27.55■■■□□ 2
ATPAF2Q8N5M1 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC27.54■■■□□ 2
ATPAF2Q8N5M1 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC27.54■■■□□ 2
ATPAF2Q8N5M1 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC27.54■■■□□ 2
ATPAF2Q8N5M1 CAHM-201ENST00000604200 896 ntBASIC27.54■■■□□ 2
ATPAF2Q8N5M1 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
ATPAF2Q8N5M1 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC27.52■■■□□ 2
ATPAF2Q8N5M1 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC27.52■■■□□ 2
ATPAF2Q8N5M1 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■■□□ 2
ATPAF2Q8N5M1 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC27.51■■□□□ 1.99
ATPAF2Q8N5M1 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
ATPAF2Q8N5M1 EBPL-202ENST00000378268 680 ntTSL 3 BASIC27.51■■□□□ 1.99
ATPAF2Q8N5M1 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
ATPAF2Q8N5M1 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
ATPAF2Q8N5M1 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC27.49■■□□□ 1.99
ATPAF2Q8N5M1 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
ATPAF2Q8N5M1 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
ATPAF2Q8N5M1 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC27.48■■□□□ 1.99
ATPAF2Q8N5M1 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC27.47■■□□□ 1.99
ATPAF2Q8N5M1 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC27.47■■□□□ 1.99
ATPAF2Q8N5M1 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC27.45■■□□□ 1.99
ATPAF2Q8N5M1 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC27.45■■□□□ 1.99
ATPAF2Q8N5M1 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC27.44■■□□□ 1.98
ATPAF2Q8N5M1 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
ATPAF2Q8N5M1 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC27.44■■□□□ 1.98
ATPAF2Q8N5M1 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC27.43■■□□□ 1.98
ATPAF2Q8N5M1 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC27.42■■□□□ 1.98
ATPAF2Q8N5M1 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
ATPAF2Q8N5M1 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
ATPAF2Q8N5M1 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
ATPAF2Q8N5M1 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
ATPAF2Q8N5M1 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
ATPAF2Q8N5M1 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
ATPAF2Q8N5M1 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC27.38■■□□□ 1.97
ATPAF2Q8N5M1 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC27.38■■□□□ 1.97
ATPAF2Q8N5M1 SUZ12P1-203ENST00000578195 985 ntBASIC27.37■■□□□ 1.97
ATPAF2Q8N5M1 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
ATPAF2Q8N5M1 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
ATPAF2Q8N5M1 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
ATPAF2Q8N5M1 DENR-202ENST00000455982 1052 ntTSL 5 BASIC27.36■■□□□ 1.97
ATPAF2Q8N5M1 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC27.36■■□□□ 1.97
ATPAF2Q8N5M1 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
ATPAF2Q8N5M1 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 8.3 ms