Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
KRT78Q8N1N4 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
KRT78Q8N1N4 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
KRT78Q8N1N4 SETD8P1-201ENST00000623146 1180 ntBASIC26.09■■□□□ 1.77
KRT78Q8N1N4 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
KRT78Q8N1N4 ST7-202ENST00000323984 2142 ntTSL 5 BASIC26.07■■□□□ 1.76
KRT78Q8N1N4 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
KRT78Q8N1N4 ST7-207ENST00000393449 2127 ntTSL 5 BASIC26.07■■□□□ 1.76
KRT78Q8N1N4 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
KRT78Q8N1N4 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
KRT78Q8N1N4 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
KRT78Q8N1N4 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC26.05■■□□□ 1.76
KRT78Q8N1N4 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
KRT78Q8N1N4 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
KRT78Q8N1N4 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
KRT78Q8N1N4 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC26.02■■□□□ 1.76
KRT78Q8N1N4 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
KRT78Q8N1N4 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC26.01■■□□□ 1.75
KRT78Q8N1N4 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
KRT78Q8N1N4 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
KRT78Q8N1N4 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
KRT78Q8N1N4 WASH5P-204ENST00000632292 975 ntBASIC25.99■■□□□ 1.75
KRT78Q8N1N4 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC25.99■■□□□ 1.75
KRT78Q8N1N4 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC25.99■■□□□ 1.75
KRT78Q8N1N4 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
KRT78Q8N1N4 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
KRT78Q8N1N4 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
KRT78Q8N1N4 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
KRT78Q8N1N4 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC25.97■■□□□ 1.75
KRT78Q8N1N4 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
KRT78Q8N1N4 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
KRT78Q8N1N4 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
KRT78Q8N1N4 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
KRT78Q8N1N4 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC25.95■■□□□ 1.74
KRT78Q8N1N4 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
KRT78Q8N1N4 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC25.94■■□□□ 1.74
KRT78Q8N1N4 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
KRT78Q8N1N4 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
KRT78Q8N1N4 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
KRT78Q8N1N4 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC25.91■■□□□ 1.74
KRT78Q8N1N4 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC25.9■■□□□ 1.74
KRT78Q8N1N4 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
KRT78Q8N1N4 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
KRT78Q8N1N4 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
KRT78Q8N1N4 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC25.89■■□□□ 1.74
KRT78Q8N1N4 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
KRT78Q8N1N4 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC25.88■■□□□ 1.73
KRT78Q8N1N4 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
KRT78Q8N1N4 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
KRT78Q8N1N4 AC097358.2-201ENST00000607541 1159 ntBASIC25.87■■□□□ 1.73
KRT78Q8N1N4 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
KRT78Q8N1N4 AL161658.1-201ENST00000623641 1967 ntBASIC25.85■■□□□ 1.73
KRT78Q8N1N4 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
KRT78Q8N1N4 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
KRT78Q8N1N4 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
KRT78Q8N1N4 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
KRT78Q8N1N4 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC25.84■■□□□ 1.73
KRT78Q8N1N4 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC25.83■■□□□ 1.72
KRT78Q8N1N4 AC136428.2-201ENST00000563187 214 ntBASIC25.82■■□□□ 1.72
KRT78Q8N1N4 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC25.82■■□□□ 1.72
KRT78Q8N1N4 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC25.81■■□□□ 1.72
KRT78Q8N1N4 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC25.81■■□□□ 1.72
KRT78Q8N1N4 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
KRT78Q8N1N4 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC25.8■■□□□ 1.72
KRT78Q8N1N4 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
KRT78Q8N1N4 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
KRT78Q8N1N4 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
KRT78Q8N1N4 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
KRT78Q8N1N4 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC25.78■■□□□ 1.72
KRT78Q8N1N4 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
KRT78Q8N1N4 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
KRT78Q8N1N4 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
KRT78Q8N1N4 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC25.77■■□□□ 1.72
KRT78Q8N1N4 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC25.77■■□□□ 1.72
KRT78Q8N1N4 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
KRT78Q8N1N4 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
KRT78Q8N1N4 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC25.77■■□□□ 1.72
KRT78Q8N1N4 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
KRT78Q8N1N4 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
KRT78Q8N1N4 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
KRT78Q8N1N4 AL391121.1-201ENST00000607967 1349 ntBASIC25.76■■□□□ 1.71
KRT78Q8N1N4 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC25.76■■□□□ 1.71
KRT78Q8N1N4 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC25.74■■□□□ 1.71
KRT78Q8N1N4 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
KRT78Q8N1N4 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
KRT78Q8N1N4 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
KRT78Q8N1N4 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC25.74■■□□□ 1.71
KRT78Q8N1N4 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC25.74■■□□□ 1.71
KRT78Q8N1N4 EBPL-202ENST00000378268 680 ntTSL 3 BASIC25.73■■□□□ 1.71
KRT78Q8N1N4 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC25.73■■□□□ 1.71
KRT78Q8N1N4 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
KRT78Q8N1N4 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
KRT78Q8N1N4 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
KRT78Q8N1N4 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC25.72■■□□□ 1.71
KRT78Q8N1N4 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC25.72■■□□□ 1.71
KRT78Q8N1N4 CAHM-201ENST00000604200 896 ntBASIC25.72■■□□□ 1.71
KRT78Q8N1N4 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
KRT78Q8N1N4 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC25.7■■□□□ 1.71
KRT78Q8N1N4 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
KRT78Q8N1N4 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms