Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC29.97■■■□□ 2.39
CDKAL1Q5VV42 AL031258.1-201ENST00000623562 325 ntBASIC29.94■■■□□ 2.38
CDKAL1Q5VV42 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC29.92■■■□□ 2.38
CDKAL1Q5VV42 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC29.92■■■□□ 2.38
CDKAL1Q5VV42 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
CDKAL1Q5VV42 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
CDKAL1Q5VV42 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC29.91■■■□□ 2.38
CDKAL1Q5VV42 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
CDKAL1Q5VV42 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC29.88■■■□□ 2.37
CDKAL1Q5VV42 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC29.88■■■□□ 2.37
CDKAL1Q5VV42 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
CDKAL1Q5VV42 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC29.87■■■□□ 2.37
CDKAL1Q5VV42 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
CDKAL1Q5VV42 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC29.86■■■□□ 2.37
CDKAL1Q5VV42 ABCB10P3-201ENST00000561950 2166 ntBASIC29.86■■■□□ 2.37
CDKAL1Q5VV42 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
CDKAL1Q5VV42 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC29.86■■■□□ 2.37
CDKAL1Q5VV42 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC29.85■■■□□ 2.37
CDKAL1Q5VV42 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC29.85■■■□□ 2.37
CDKAL1Q5VV42 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
CDKAL1Q5VV42 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC29.85■■■□□ 2.37
CDKAL1Q5VV42 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
CDKAL1Q5VV42 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
CDKAL1Q5VV42 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC29.84■■■□□ 2.37
CDKAL1Q5VV42 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC29.84■■■□□ 2.37
CDKAL1Q5VV42 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
CDKAL1Q5VV42 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
CDKAL1Q5VV42 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC29.82■■■□□ 2.36
CDKAL1Q5VV42 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
CDKAL1Q5VV42 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
CDKAL1Q5VV42 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
CDKAL1Q5VV42 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC29.79■■■□□ 2.36
CDKAL1Q5VV42 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
CDKAL1Q5VV42 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
CDKAL1Q5VV42 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC29.77■■■□□ 2.36
CDKAL1Q5VV42 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC29.76■■■□□ 2.36
CDKAL1Q5VV42 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
CDKAL1Q5VV42 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
CDKAL1Q5VV42 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
CDKAL1Q5VV42 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
CDKAL1Q5VV42 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC29.74■■■□□ 2.35
CDKAL1Q5VV42 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
CDKAL1Q5VV42 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC29.74■■■□□ 2.35
CDKAL1Q5VV42 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
CDKAL1Q5VV42 AL161658.1-201ENST00000623641 1967 ntBASIC29.73■■■□□ 2.35
CDKAL1Q5VV42 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC29.73■■■□□ 2.35
CDKAL1Q5VV42 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC29.72■■■□□ 2.35
CDKAL1Q5VV42 AP002365.1-201ENST00000603448 772 ntBASIC29.72■■■□□ 2.35
CDKAL1Q5VV42 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC29.72■■■□□ 2.35
CDKAL1Q5VV42 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC29.72■■■□□ 2.35
CDKAL1Q5VV42 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
CDKAL1Q5VV42 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
CDKAL1Q5VV42 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
CDKAL1Q5VV42 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
CDKAL1Q5VV42 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC29.69■■■□□ 2.34
CDKAL1Q5VV42 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC29.69■■■□□ 2.34
CDKAL1Q5VV42 ST7-AS1-201ENST00000456775 1889 ntBASIC29.69■■■□□ 2.34
CDKAL1Q5VV42 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC29.69■■■□□ 2.34
CDKAL1Q5VV42 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
CDKAL1Q5VV42 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC29.68■■■□□ 2.34
CDKAL1Q5VV42 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
CDKAL1Q5VV42 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC29.67■■■□□ 2.34
CDKAL1Q5VV42 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC29.67■■■□□ 2.34
CDKAL1Q5VV42 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
CDKAL1Q5VV42 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
CDKAL1Q5VV42 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC29.65■■■□□ 2.34
CDKAL1Q5VV42 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
CDKAL1Q5VV42 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC29.64■■■□□ 2.34
CDKAL1Q5VV42 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC29.64■■■□□ 2.33
CDKAL1Q5VV42 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC29.64■■■□□ 2.33
CDKAL1Q5VV42 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
CDKAL1Q5VV42 AC139426.1-201ENST00000568218 2529 ntBASIC29.62■■■□□ 2.33
CDKAL1Q5VV42 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC29.61■■■□□ 2.33
CDKAL1Q5VV42 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC29.6■■■□□ 2.33
CDKAL1Q5VV42 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC29.6■■■□□ 2.33
CDKAL1Q5VV42 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC29.59■■■□□ 2.33
CDKAL1Q5VV42 SHF-206ENST00000560471 2499 ntTSL 5 BASIC29.59■■■□□ 2.33
CDKAL1Q5VV42 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC29.57■■■□□ 2.32
CDKAL1Q5VV42 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC29.57■■■□□ 2.32
CDKAL1Q5VV42 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
CDKAL1Q5VV42 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
CDKAL1Q5VV42 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
CDKAL1Q5VV42 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC29.56■■■□□ 2.32
CDKAL1Q5VV42 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC29.56■■■□□ 2.32
CDKAL1Q5VV42 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
CDKAL1Q5VV42 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC29.55■■■□□ 2.32
CDKAL1Q5VV42 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
CDKAL1Q5VV42 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC29.52■■■□□ 2.32
CDKAL1Q5VV42 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
CDKAL1Q5VV42 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
CDKAL1Q5VV42 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
CDKAL1Q5VV42 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
CDKAL1Q5VV42 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
CDKAL1Q5VV42 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC29.48■■■□□ 2.31
CDKAL1Q5VV42 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC29.48■■■□□ 2.31
CDKAL1Q5VV42 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
CDKAL1Q5VV42 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
CDKAL1Q5VV42 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC29.46■■■□□ 2.31
CDKAL1Q5VV42 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
CDKAL1Q5VV42 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC29.45■■■□□ 2.31
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms