Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
PRICKLE4Q2TBC4 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
PRICKLE4Q2TBC4 ST7-205ENST00000393446 2114 ntTSL 5 BASIC25.37■■□□□ 1.65
PRICKLE4Q2TBC4 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
PRICKLE4Q2TBC4 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
PRICKLE4Q2TBC4 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PRICKLE4Q2TBC4 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
PRICKLE4Q2TBC4 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC25.34■■□□□ 1.65
PRICKLE4Q2TBC4 AC136428.2-201ENST00000563187 214 ntBASIC25.34■■□□□ 1.65
PRICKLE4Q2TBC4 WASH5P-204ENST00000632292 975 ntBASIC25.34■■□□□ 1.65
PRICKLE4Q2TBC4 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
PRICKLE4Q2TBC4 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PRICKLE4Q2TBC4 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC25.33■■□□□ 1.65
PRICKLE4Q2TBC4 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
PRICKLE4Q2TBC4 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC25.33■■□□□ 1.65
PRICKLE4Q2TBC4 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC25.32■■□□□ 1.64
PRICKLE4Q2TBC4 AC097358.2-201ENST00000607541 1159 ntBASIC25.32■■□□□ 1.64
PRICKLE4Q2TBC4 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PRICKLE4Q2TBC4 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PRICKLE4Q2TBC4 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC25.3■■□□□ 1.64
PRICKLE4Q2TBC4 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
PRICKLE4Q2TBC4 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC25.29■■□□□ 1.64
PRICKLE4Q2TBC4 ST7-202ENST00000323984 2142 ntTSL 5 BASIC25.28■■□□□ 1.64
PRICKLE4Q2TBC4 ST7-207ENST00000393449 2127 ntTSL 5 BASIC25.28■■□□□ 1.64
PRICKLE4Q2TBC4 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC25.28■■□□□ 1.64
PRICKLE4Q2TBC4 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PRICKLE4Q2TBC4 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
PRICKLE4Q2TBC4 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC25.27■■□□□ 1.64
PRICKLE4Q2TBC4 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
PRICKLE4Q2TBC4 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC25.26■■□□□ 1.63
PRICKLE4Q2TBC4 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PRICKLE4Q2TBC4 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC25.25■■□□□ 1.63
PRICKLE4Q2TBC4 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
PRICKLE4Q2TBC4 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PRICKLE4Q2TBC4 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC25.23■■□□□ 1.63
PRICKLE4Q2TBC4 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
PRICKLE4Q2TBC4 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC25.23■■□□□ 1.63
PRICKLE4Q2TBC4 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
PRICKLE4Q2TBC4 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PRICKLE4Q2TBC4 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC25.22■■□□□ 1.63
PRICKLE4Q2TBC4 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC25.21■■□□□ 1.63
PRICKLE4Q2TBC4 CAHM-201ENST00000604200 896 ntBASIC25.21■■□□□ 1.63
PRICKLE4Q2TBC4 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
PRICKLE4Q2TBC4 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC25.2■■□□□ 1.63
PRICKLE4Q2TBC4 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC25.2■■□□□ 1.63
PRICKLE4Q2TBC4 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PRICKLE4Q2TBC4 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PRICKLE4Q2TBC4 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
PRICKLE4Q2TBC4 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PRICKLE4Q2TBC4 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PRICKLE4Q2TBC4 AL391121.1-201ENST00000607967 1349 ntBASIC25.19■■□□□ 1.62
PRICKLE4Q2TBC4 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
PRICKLE4Q2TBC4 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PRICKLE4Q2TBC4 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
PRICKLE4Q2TBC4 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC25.17■■□□□ 1.62
PRICKLE4Q2TBC4 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC25.17■■□□□ 1.62
PRICKLE4Q2TBC4 AL161658.1-201ENST00000623641 1967 ntBASIC25.16■■□□□ 1.62
PRICKLE4Q2TBC4 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PRICKLE4Q2TBC4 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PRICKLE4Q2TBC4 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
PRICKLE4Q2TBC4 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
PRICKLE4Q2TBC4 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
PRICKLE4Q2TBC4 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC25.13■■□□□ 1.61
PRICKLE4Q2TBC4 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
PRICKLE4Q2TBC4 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
PRICKLE4Q2TBC4 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
PRICKLE4Q2TBC4 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PRICKLE4Q2TBC4 EBPL-202ENST00000378268 680 ntTSL 3 BASIC25.11■■□□□ 1.61
PRICKLE4Q2TBC4 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PRICKLE4Q2TBC4 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC25.11■■□□□ 1.61
PRICKLE4Q2TBC4 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC25.1■■□□□ 1.61
PRICKLE4Q2TBC4 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
PRICKLE4Q2TBC4 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC25.08■■□□□ 1.61
PRICKLE4Q2TBC4 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
PRICKLE4Q2TBC4 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC25.08■■□□□ 1.61
PRICKLE4Q2TBC4 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
PRICKLE4Q2TBC4 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PRICKLE4Q2TBC4 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC25.07■■□□□ 1.6
PRICKLE4Q2TBC4 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PRICKLE4Q2TBC4 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PRICKLE4Q2TBC4 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
PRICKLE4Q2TBC4 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC25.05■■□□□ 1.6
PRICKLE4Q2TBC4 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
PRICKLE4Q2TBC4 SUZ12P1-203ENST00000578195 985 ntBASIC25.04■■□□□ 1.6
PRICKLE4Q2TBC4 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC25.04■■□□□ 1.6
PRICKLE4Q2TBC4 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC25.04■■□□□ 1.6
PRICKLE4Q2TBC4 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
PRICKLE4Q2TBC4 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
PRICKLE4Q2TBC4 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PRICKLE4Q2TBC4 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PRICKLE4Q2TBC4 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
PRICKLE4Q2TBC4 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
PRICKLE4Q2TBC4 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC25.01■■□□□ 1.59
PRICKLE4Q2TBC4 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PRICKLE4Q2TBC4 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PRICKLE4Q2TBC4 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
PRICKLE4Q2TBC4 DENR-202ENST00000455982 1052 ntTSL 5 BASIC25■■□□□ 1.59
PRICKLE4Q2TBC4 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PRICKLE4Q2TBC4 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
PRICKLE4Q2TBC4 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC24.99■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 7 ms