Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC30.75■■■□□ 2.51
PRPHP41219 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
PRPHP41219 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
PRPHP41219 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
PRPHP41219 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
PRPHP41219 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC30.73■■■□□ 2.51
PRPHP41219 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
PRPHP41219 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
PRPHP41219 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC30.72■■■□□ 2.51
PRPHP41219 SETD8P1-201ENST00000623146 1180 ntBASIC30.7■■■□□ 2.51
PRPHP41219 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC30.69■■■□□ 2.5
PRPHP41219 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
PRPHP41219 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
PRPHP41219 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC30.67■■■□□ 2.5
PRPHP41219 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
PRPHP41219 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
PRPHP41219 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
PRPHP41219 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
PRPHP41219 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
PRPHP41219 WASH5P-204ENST00000632292 975 ntBASIC30.63■■■□□ 2.49
PRPHP41219 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC30.62■■■□□ 2.49
PRPHP41219 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
PRPHP41219 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
PRPHP41219 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC30.61■■■□□ 2.49
PRPHP41219 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
PRPHP41219 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
PRPHP41219 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
PRPHP41219 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC30.58■■■□□ 2.49
PRPHP41219 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC30.57■■■□□ 2.48
PRPHP41219 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC30.57■■■□□ 2.48
PRPHP41219 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
PRPHP41219 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
PRPHP41219 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC30.56■■■□□ 2.48
PRPHP41219 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
PRPHP41219 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
PRPHP41219 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
PRPHP41219 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
PRPHP41219 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC30.52■■■□□ 2.48
PRPHP41219 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC30.51■■■□□ 2.47
PRPHP41219 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC30.51■■■□□ 2.47
PRPHP41219 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
PRPHP41219 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC30.49■■■□□ 2.47
PRPHP41219 AC136428.2-201ENST00000563187 214 ntBASIC30.49■■■□□ 2.47
PRPHP41219 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
PRPHP41219 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC30.48■■■□□ 2.47
PRPHP41219 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
PRPHP41219 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC30.46■■■□□ 2.47
PRPHP41219 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC30.46■■■□□ 2.47
PRPHP41219 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
PRPHP41219 AL161658.1-201ENST00000623641 1967 ntBASIC30.46■■■□□ 2.47
PRPHP41219 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC30.45■■■□□ 2.47
PRPHP41219 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
PRPHP41219 AC097358.2-201ENST00000607541 1159 ntBASIC30.44■■■□□ 2.46
PRPHP41219 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC30.44■■■□□ 2.46
PRPHP41219 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
PRPHP41219 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
PRPHP41219 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
PRPHP41219 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
PRPHP41219 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
PRPHP41219 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
PRPHP41219 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
PRPHP41219 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC30.4■■■□□ 2.46
PRPHP41219 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
PRPHP41219 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC30.38■■■□□ 2.45
PRPHP41219 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC30.38■■■□□ 2.45
PRPHP41219 AL391121.1-201ENST00000607967 1349 ntBASIC30.38■■■□□ 2.45
PRPHP41219 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC30.37■■■□□ 2.45
PRPHP41219 CAHM-201ENST00000604200 896 ntBASIC30.37■■■□□ 2.45
PRPHP41219 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
PRPHP41219 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
PRPHP41219 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC30.36■■■□□ 2.45
PRPHP41219 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
PRPHP41219 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
PRPHP41219 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
PRPHP41219 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
PRPHP41219 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC30.35■■■□□ 2.45
PRPHP41219 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC30.34■■■□□ 2.45
PRPHP41219 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
PRPHP41219 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC30.33■■■□□ 2.45
PRPHP41219 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC30.33■■■□□ 2.45
PRPHP41219 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
PRPHP41219 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
PRPHP41219 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC30.32■■■□□ 2.44
PRPHP41219 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC30.32■■■□□ 2.44
PRPHP41219 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC30.32■■■□□ 2.44
PRPHP41219 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
PRPHP41219 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
PRPHP41219 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC30.3■■■□□ 2.44
PRPHP41219 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC30.3■■■□□ 2.44
PRPHP41219 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
PRPHP41219 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
PRPHP41219 EBPL-202ENST00000378268 680 ntTSL 3 BASIC30.27■■■□□ 2.44
PRPHP41219 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC30.26■■■□□ 2.44
PRPHP41219 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC30.25■■■□□ 2.43
PRPHP41219 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
PRPHP41219 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
PRPHP41219 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
PRPHP41219 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC30.24■■■□□ 2.43
PRPHP41219 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC30.23■■■□□ 2.43
PRPHP41219 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms