Protein–RNA interactions for Protein: P38811

TRA1, Transcription-associated protein 1, yeastyeast

Predictions only

Length 3,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TRA1P38811 RIB1YBL033C 1038 nt8.77□□□□□ -1.01
TRA1P38811 RIB2YOL066C 1776 nt8.77□□□□□ -1.01
TRA1P38811 PEX2YJL210W 816 nt8.76□□□□□ -1.01
TRA1P38811 RTF1YGL244W 1677 nt8.76□□□□□ -1.01
TRA1P38811 HIP1YGR191W 1812 nt8.75□□□□□ -1.01
TRA1P38811 TIM44YIL022W 1296 nt8.75□□□□□ -1.01
TRA1P38811 APT2YDR441C 546 nt8.74□□□□□ -1.01
TRA1P38811 POP2YNR052C 1302 nt8.73□□□□□ -1.01
TRA1P38811 YJL064WYJL064W 396 nt8.73□□□□□ -1.01
TRA1P38811 GDH3YAL062W 1374 nt8.73□□□□□ -1.01
TRA1P38811 YGR201CYGR201C 678 nt8.72□□□□□ -1.01
TRA1P38811 YHR056W-AYHR056W-A 435 nt8.72□□□□□ -1.01
TRA1P38811 STP3YLR375W 1032 nt8.71□□□□□ -1.01
TRA1P38811 AAC1YMR056C 930 nt8.71□□□□□ -1.01
TRA1P38811 PCH2YBR186W 1695 nt8.7□□□□□ -1.02
TRA1P38811 YBR232CYBR232C 360 nt8.7□□□□□ -1.02
TRA1P38811 GND1YHR183W 1470 nt8.7□□□□□ -1.02
TRA1P38811 AVT6YER119C 1347 nt8.69□□□□□ -1.02
TRA1P38811 TIP1YBR067C 633 nt8.69□□□□□ -1.02
TRA1P38811 RDN18-1RDN18-1 1800 nt8.69□□□□□ -1.02
TRA1P38811 RDN18-2RDN18-2 1800 nt8.69□□□□□ -1.02
TRA1P38811 SHH4YLR164W 507 nt8.68□□□□□ -1.02
TRA1P38811 LOT5YKL183W 921 nt8.67□□□□□ -1.02
TRA1P38811 SOD2YHR008C 702 nt8.66□□□□□ -1.02
TRA1P38811 YCR102CYCR102C 1107 nt8.65□□□□□ -1.02
TRA1P38811 BUD20YLR074C 501 nt8.65□□□□□ -1.03
TRA1P38811 TOM6YOR045W 186 nt8.65□□□□□ -1.03
TRA1P38811 DUT1YBR252W 444 nt8.65□□□□□ -1.03
TRA1P38811 YPI1YFR003C 468 nt8.64□□□□□ -1.03
TRA1P38811 CLB6YGR109C 1143 nt8.63□□□□□ -1.03
TRA1P38811 ALD4YOR374W 1560 nt8.61□□□□□ -1.03
TRA1P38811 YFL054CYFL054C 1941 nt8.61□□□□□ -1.03
TRA1P38811 TSC10YBR265W 963 nt8.6□□□□□ -1.03
TRA1P38811 YPL222C-AYPL222C-A 246 nt8.59□□□□□ -1.03
TRA1P38811 PAU19YMR325W 375 nt8.57□□□□□ -1.04
TRA1P38811 NRT1YOR071C 1797 nt8.57□□□□□ -1.04
TRA1P38811 MIC12YBR262C 321 nt8.56□□□□□ -1.04
TRA1P38811 ATG15YCR068W 1563 nt8.55□□□□□ -1.04
TRA1P38811 ZTA1YBR046C 1005 nt8.54□□□□□ -1.04
TRA1P38811 YER152W-AYER152W-A 567 nt8.53□□□□□ -1.04
TRA1P38811 BOP3YNL042W 1191 nt8.53□□□□□ -1.04
TRA1P38811 YIA6YIL006W 1122 nt8.53□□□□□ -1.04
TRA1P38811 UTH1YKR042W 1098 nt8.53□□□□□ -1.04
TRA1P38811 TIR3YIL011W 810 nt8.52□□□□□ -1.05
TRA1P38811 MET28YIR017C 564 nt8.52□□□□□ -1.05
TRA1P38811 CCA1YER168C 1641 nt8.5□□□□□ -1.05
TRA1P38811 KRE1YNL322C 942 nt8.5□□□□□ -1.05
TRA1P38811 SWE1YJL187C 2460 nt8.49□□□□□ -1.05
TRA1P38811 SMM1YNR015W 1155 nt8.49□□□□□ -1.05
TRA1P38811 RAX1YOR301W 1308 nt8.46□□□□□ -1.06
TRA1P38811 NBP35YGL091C 987 nt8.46□□□□□ -1.06
TRA1P38811 HHO1YPL127C 777 nt8.45□□□□□ -1.06
TRA1P38811 VRG4YGL225W 1014 nt8.43□□□□□ -1.06
TRA1P38811 PLB1YMR008C 1995 nt8.43□□□□□ -1.06
TRA1P38811 CCT5YJR064W 1689 nt8.42□□□□□ -1.06
TRA1P38811 TIF6YPR016C 738 nt8.41□□□□□ -1.06
TRA1P38811 FCY21YER060W 1587 nt8.4□□□□□ -1.06
TRA1P38811 POM34YLR018C 900 nt8.4□□□□□ -1.06
TRA1P38811 APS2YJR058C 444 nt8.4□□□□□ -1.07
TRA1P38811 MFG1YDL233W 1377 nt8.36□□□□□ -1.07
TRA1P38811 SAM50YNL026W 1455 nt8.36□□□□□ -1.07
TRA1P38811 TUB4YLR212C 1422 nt8.36□□□□□ -1.07
TRA1P38811 GOR1YNL274C 1053 nt8.36□□□□□ -1.07
TRA1P38811 GAP1YKR039W 1809 nt8.36□□□□□ -1.07
TRA1P38811 UGA4YDL210W 1716 nt8.35□□□□□ -1.07
TRA1P38811 AQY2YLL052C 450 nt8.33□□□□□ -1.08
TRA1P38811 YML089CYML089C 369 nt8.31□□□□□ -1.08
TRA1P38811 QDR2YIL121W 1629 nt8.3□□□□□ -1.08
TRA1P38811 MTG2YHR168W 1557 nt8.3□□□□□ -1.08
TRA1P38811 YJL055WYJL055W 738 nt8.3□□□□□ -1.08
TRA1P38811 YMR206WYMR206W 942 nt8.29□□□□□ -1.08
TRA1P38811 SEC11YIR022W 504 nt8.29□□□□□ -1.08
TRA1P38811 KAE1YKR038C 1161 nt8.28□□□□□ -1.08
TRA1P38811 THI72YOR192C 1800 nt8.28□□□□□ -1.08
TRA1P38811 PRO1YDR300C 1287 nt8.28□□□□□ -1.08
TRA1P38811 RPL12BYDR418W 498 nt8.27□□□□□ -1.09
TRA1P38811 LSB3YFR024C-A 1380 nt8.27□□□□□ -1.09
TRA1P38811 HXT12YIL170W 1374 nt8.26□□□□□ -1.09
TRA1P38811 LSC2YGR244C 1284 nt8.26□□□□□ -1.09
TRA1P38811 SNZ1YMR096W 894 nt8.25□□□□□ -1.09
TRA1P38811 YCP4YCR004C 744 nt8.25□□□□□ -1.09
TRA1P38811 ALP1YNL270C 1722 nt8.24□□□□□ -1.09
TRA1P38811 PRY1YJL079C 900 nt8.24□□□□□ -1.09
TRA1P38811 YOR268CYOR268C 399 nt8.22□□□□□ -1.09
TRA1P38811 PAR32YDL173W 888 nt8.21□□□□□ -1.1
TRA1P38811 DIF1YLR437C 402 nt8.2□□□□□ -1.1
TRA1P38811 ARP6YLR085C 1317 nt8.19□□□□□ -1.1
TRA1P38811 GSF2YML048W 1212 nt8.18□□□□□ -1.1
TRA1P38811 FIT3YOR383C 615 nt8.18□□□□□ -1.1
TRA1P38811 SAM3YPL274W 1764 nt8.18□□□□□ -1.1
TRA1P38811 DUS1YML080W 1272 nt8.18□□□□□ -1.1
TRA1P38811 YAR028WYAR028W 705 nt8.17□□□□□ -1.1
TRA1P38811 YOR343CYOR343C 327 nt8.17□□□□□ -1.1
TRA1P38811 PAU21YOR394W 495 nt8.17□□□□□ -1.1
TRA1P38811 PAU22YPL282C 495 nt8.17□□□□□ -1.1
TRA1P38811 POT1YIL160C 1254 nt8.16□□□□□ -1.1
TRA1P38811 TAF13YML098W 504 nt8.16□□□□□ -1.1
TRA1P38811 LSB5YCL034W 1065 nt8.15□□□□□ -1.1
TRA1P38811 STR3YGL184C 1398 nt8.14□□□□□ -1.11
TRA1P38811 GAL3YDR009W 1563 nt8.14□□□□□ -1.11
Retrieved 100 of 7,029 protein–RNA pairs in 36.4 ms