Protein–RNA interactions for Protein: P32588

PUB1, Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1, yeastyeast

Known RBP RIP-Chip data

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUB1P32588 ARP6YLR085C 1317 nt9.09□□□□□ -0.95
PUB1P32588 YIR018C-AYIR018C-A 138 nt9.09□□□□□ -0.95
PUB1P32588 SRN2YLR119W 642 nt9.09□□□□□ -0.95
PUB1P32588 YFL066CYFL066C 1179 nt9.07□□□□□ -0.96
PUB1P32588 SEM1YDR363W-A 270 nt9.05□□□□□ -0.96
PUB1P32588 YEL009C-AYEL009C-A 408 nt9.05□□□□□ -0.96
PUB1P32588 VPS75YNL246W 795 nt9.05□□□□□ -0.96 RIP-Chip
PUB1P32588 MET8YBR213W 825 nt9.05□□□□□ -0.96
PUB1P32588 SBA1YKL117W 651 nt9.04□□□□□ -0.96
PUB1P32588 YAT1YAR035W 2064 nt9.04□□□□□ -0.96
PUB1P32588 CMP2YML057W 1815 nt9.03□□□□□ -0.96
PUB1P32588 PRM5YIL117C 957 nt9.03□□□□□ -0.96 RIP-Chip
PUB1P32588 ABZ2YMR289W 1125 nt9.03□□□□□ -0.96
PUB1P32588 ALD4YOR374W 1560 nt9.02□□□□□ -0.97
PUB1P32588 HIF1YLL022C 1158 nt9.01□□□□□ -0.97
PUB1P32588 YLR122CYLR122C 378 nt8.99□□□□□ -0.97
PUB1P32588 TIR3YIL011W 810 nt8.98□□□□□ -0.97
PUB1P32588 NDI1YML120C 1542 nt8.98□□□□□ -0.97 RIP-Chip
PUB1P32588 LSC2YGR244C 1284 nt8.97□□□□□ -0.97 RIP-Chip
PUB1P32588 UTR1YJR049C 1593 nt8.97□□□□□ -0.97
PUB1P32588 GAP1YKR039W 1809 nt8.96□□□□□ -0.98 RIP-Chip
PUB1P32588 SAM35YHR083W 990 nt8.94□□□□□ -0.98
PUB1P32588 PAU7YAR020C 168 nt8.94□□□□□ -0.98
PUB1P32588 SHH4YLR164W 507 nt8.92□□□□□ -0.98
PUB1P32588 ARP10YDR106W 855 nt8.91□□□□□ -0.98
PUB1P32588 PRO1YDR300C 1287 nt8.91□□□□□ -0.98
PUB1P32588 CLB6YGR109C 1143 nt8.91□□□□□ -0.98
PUB1P32588 INA1YLR413W 2028 nt8.9□□□□□ -0.98 RIP-Chip
PUB1P32588 NAT4YMR069W 858 nt8.88□□□□□ -0.99
PUB1P32588 SPT20YOL148C 1815 nt8.88□□□□□ -0.99
PUB1P32588 ATG15YCR068W 1563 nt8.87□□□□□ -0.99
PUB1P32588 POM34YLR018C 900 nt8.87□□□□□ -0.99
PUB1P32588 RPC82YPR190C 1965 nt8.85□□□□□ -0.99
PUB1P32588 YML089CYML089C 369 nt8.85□□□□□ -0.99
PUB1P32588 ZRT3YKL175W 1512 nt8.85□□□□□ -0.99 RIP-Chip
PUB1P32588 YDR010CYDR010C 333 nt8.83□□□□□ -1
PUB1P32588 MIR1YJR077C 936 nt8.83□□□□□ -1 RIP-Chip
PUB1P32588 SHB17YKR043C 816 nt8.83□□□□□ -1
PUB1P32588 YHL019W-AYHL019W-A 594 nt8.82□□□□□ -1
PUB1P32588 MSF1YPR047W 1410 nt8.81□□□□□ -1
PUB1P32588 SFA1YDL168W 1161 nt8.8□□□□□ -1
PUB1P32588 THI74YDR438W 1113 nt8.79□□□□□ -1
PUB1P32588 DIF1YLR437C 402 nt8.79□□□□□ -1 RIP-Chip
PUB1P32588 TOM6YOR045W 186 nt8.78□□□□□ -1 RIP-Chip
PUB1P32588 RET2YFR051C 1641 nt8.78□□□□□ -1
PUB1P32588 HXT1YHR094C 1713 nt8.76□□□□□ -1.01 RIP-Chip
PUB1P32588 HSL7YBR133C 2484 nt8.76□□□□□ -1.01
PUB1P32588 TOM20YGR082W 552 nt8.75□□□□□ -1.01 RIP-Chip
PUB1P32588 PET20YPL159C 762 nt8.75□□□□□ -1.01 RIP-Chip
PUB1P32588 DBP1YPL119C 1854 nt8.74□□□□□ -1.01
PUB1P32588 YJL067WYJL067W 351 nt8.73□□□□□ -1.01
PUB1P32588 PHO89YBR296C 1725 nt8.72□□□□□ -1.01
PUB1P32588 UBA4YHR111W 1323 nt8.72□□□□□ -1.01
PUB1P32588 PEX2YJL210W 816 nt8.71□□□□□ -1.02 RIP-Chip
PUB1P32588 TIF6YPR016C 738 nt8.7□□□□□ -1.02 RIP-Chip
PUB1P32588 RDN25-1RDN25-1 3396 nt8.69□□□□□ -1.02
PUB1P32588 RDN25-2RDN25-2 3396 nt8.69□□□□□ -1.02
PUB1P32588 UTP6YDR449C 1323 nt8.69□□□□□ -1.02
PUB1P32588 LCP5YER127W 1074 nt8.68□□□□□ -1.02
PUB1P32588 HIP1YGR191W 1812 nt8.68□□□□□ -1.02
PUB1P32588 YCR099CYCR099C 468 nt8.67□□□□□ -1.02
PUB1P32588 SHY1YGR112W 1170 nt8.67□□□□□ -1.02
PUB1P32588 YAR028WYAR028W 705 nt8.67□□□□□ -1.02 RIP-Chip
PUB1P32588 SED1YDR077W 1017 nt8.66□□□□□ -1.02 RIP-Chip
PUB1P32588 YSR3YKR053C 1215 nt8.66□□□□□ -1.02 RIP-Chip
PUB1P32588 LIP1YMR298W 453 nt8.66□□□□□ -1.02 RIP-Chip
PUB1P32588 YCR087WYCR087W 516 nt8.64□□□□□ -1.03
PUB1P32588 AI5_BETAQ0075 1065 nt8.64□□□□□ -1.03 RIP-Chip
PUB1P32588 MRP20YDR405W 792 nt8.64□□□□□ -1.03
PUB1P32588 YGL034CYGL034C 366 nt8.64□□□□□ -1.03
PUB1P32588 MET28YIR017C 564 nt8.64□□□□□ -1.03
PUB1P32588 COQ2YNR041C 1119 nt8.64□□□□□ -1.03
PUB1P32588 YBL086CYBL086C 1401 nt8.63□□□□□ -1.03
PUB1P32588 YMR244WYMR244W 1068 nt8.63□□□□□ -1.03
PUB1P32588 URH1YDR400W 1023 nt8.61□□□□□ -1.03 RIP-Chip
PUB1P32588 YER190C-AYER190C-A 576 nt8.61□□□□□ -1.03
PUB1P32588 YGR296C-AYGR296C-A 576 nt8.61□□□□□ -1.03
PUB1P32588 YML133W-AYML133W-A 576 nt8.61□□□□□ -1.03
PUB1P32588 YNL339W-AYNL339W-A 576 nt8.61□□□□□ -1.03
PUB1P32588 YPL283W-AYPL283W-A 576 nt8.61□□□□□ -1.03
PUB1P32588 NRT1YOR071C 1797 nt8.59□□□□□ -1.03 RIP-Chip
PUB1P32588 SAM1YLR180W 1149 nt8.59□□□□□ -1.03 RIP-Chip
PUB1P32588 MTG2YHR168W 1557 nt8.59□□□□□ -1.03
PUB1P32588 MUP1YGR055W 1725 nt8.58□□□□□ -1.04 RIP-Chip
PUB1P32588 snR78snR78 87 nt8.58□□□□□ -1.04
PUB1P32588 URA6YKL024C 615 nt8.58□□□□□ -1.04
PUB1P32588 UTH1YKR042W 1098 nt8.58□□□□□ -1.04 RIP-Chip
PUB1P32588 ILV3YJR016C 1758 nt8.58□□□□□ -1.04 RIP-Chip
PUB1P32588 AI3Q0060 1248 nt8.57□□□□□ -1.04 RIP-Chip
PUB1P32588 XYL2YLR070C 1071 nt8.57□□□□□ -1.04
PUB1P32588 GLR1YPL091W 1452 nt8.57□□□□□ -1.04
PUB1P32588 AKR2YOR034C 2250 nt8.56□□□□□ -1.04 RIP-Chip
PUB1P32588 HOL1YNR055C 1761 nt8.56□□□□□ -1.04
PUB1P32588 RIM8YGL045W 1629 nt8.56□□□□□ -1.04
PUB1P32588 RPL4BYDR012W 1089 nt8.56□□□□□ -1.04
PUB1P32588 CWC15YDR163W 528 nt8.56□□□□□ -1.04
PUB1P32588 YIL100C-AYIL100C-A 339 nt8.56□□□□□ -1.04
PUB1P32588 SKG1YKR100C 1068 nt8.56□□□□□ -1.04 RIP-Chip
PUB1P32588 YNL024CYNL024C 741 nt8.56□□□□□ -1.04
PUB1P32588 RPL4AYBR031W 1089 nt8.56□□□□□ -1.04
Retrieved 100 of 7,029 protein–RNA pairs in 42.9 ms