Protein–RNA interactions for Protein: P32561

RPD3, Histone deacetylase RPD3, yeastyeast

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPD3P32561 TPO4YOR273C 1980 nt8.7□□□□□ -1.02
RPD3P32561 HIF1YLL022C 1158 nt8.68□□□□□ -1.02
RPD3P32561 RFC1YOR217W 2586 nt8.66□□□□□ -1.02
RPD3P32561 TAD3YLR316C 969 nt8.66□□□□□ -1.02
RPD3P32561 RIM8YGL045W 1629 nt8.64□□□□□ -1.03
RPD3P32561 ALD4YOR374W 1560 nt8.64□□□□□ -1.03
RPD3P32561 GTB1YDR221W 2109 nt8.63□□□□□ -1.03
RPD3P32561 PLB1YMR008C 1995 nt8.62□□□□□ -1.03
RPD3P32561 tL(GAG)GtL(GAG)G 82 nt8.62□□□□□ -1.03
RPD3P32561 REG2YBR050C 1017 nt8.62□□□□□ -1.03
RPD3P32561 MAE1YKL029C 2010 nt8.62□□□□□ -1.03
RPD3P32561 UGA4YDL210W 1716 nt8.62□□□□□ -1.03
RPD3P32561 URA8YJR103W 1737 nt8.61□□□□□ -1.03
RPD3P32561 PRM5YIL117C 957 nt8.6□□□□□ -1.03
RPD3P32561 URH1YDR400W 1023 nt8.58□□□□□ -1.04
RPD3P32561 YDR510C-AYDR510C-A 117 nt8.58□□□□□ -1.04
RPD3P32561 LCP5YER127W 1074 nt8.58□□□□□ -1.04
RPD3P32561 YFR018CYFR018C 1092 nt8.58□□□□□ -1.04
RPD3P32561 RRT5YFR032C 870 nt8.56□□□□□ -1.04
RPD3P32561 YGL114WYGL114W 2178 nt8.55□□□□□ -1.04
RPD3P32561 MUP1YGR055W 1725 nt8.55□□□□□ -1.04
RPD3P32561 GAL2YLR081W 1725 nt8.55□□□□□ -1.04
RPD3P32561 ARP6YLR085C 1317 nt8.54□□□□□ -1.04
RPD3P32561 PAU16YKL224C 372 nt8.53□□□□□ -1.04
RPD3P32561 YLR415CYLR415C 339 nt8.53□□□□□ -1.04
RPD3P32561 SHM2YLR058C 1410 nt8.53□□□□□ -1.04
RPD3P32561 YLR122CYLR122C 378 nt8.52□□□□□ -1.05
RPD3P32561 ARA2YMR041C 1008 nt8.52□□□□□ -1.05
RPD3P32561 BDH1YAL060W 1149 nt8.51□□□□□ -1.05
RPD3P32561 ZRT3YKL175W 1512 nt8.5□□□□□ -1.05
RPD3P32561 NBP35YGL091C 987 nt8.5□□□□□ -1.05
RPD3P32561 DAT1YML113W 747 nt8.5□□□□□ -1.05
RPD3P32561 TOK1YJL093C 2076 nt8.48□□□□□ -1.05
RPD3P32561 RSC4YKR008W 1878 nt8.47□□□□□ -1.05
RPD3P32561 HOL1YNR055C 1761 nt8.46□□□□□ -1.05
RPD3P32561 UTR1YJR049C 1593 nt8.46□□□□□ -1.06
RPD3P32561 HEM14YER014W 1620 nt8.45□□□□□ -1.06
RPD3P32561 YCR102CYCR102C 1107 nt8.45□□□□□ -1.06
RPD3P32561 AI5_BETAQ0075 1065 nt8.45□□□□□ -1.06
RPD3P32561 TOM20YGR082W 552 nt8.45□□□□□ -1.06
RPD3P32561 TIM17YJL143W 477 nt8.45□□□□□ -1.06
RPD3P32561 SBA1YKL117W 651 nt8.45□□□□□ -1.06
RPD3P32561 YSP3YOR003W 1437 nt8.45□□□□□ -1.06
RPD3P32561 COG1YGL223C 1254 nt8.44□□□□□ -1.06
RPD3P32561 YPL041CYPL041C 624 nt8.44□□□□□ -1.06
RPD3P32561 YJL118WYJL118W 660 nt8.43□□□□□ -1.06
RPD3P32561 NIT1YIL164C 600 nt8.42□□□□□ -1.06
RPD3P32561 YJL067WYJL067W 351 nt8.42□□□□□ -1.06
RPD3P32561 SAM35YHR083W 990 nt8.41□□□□□ -1.06
RPD3P32561 PRE6YOL038W 765 nt8.4□□□□□ -1.06
RPD3P32561 THI72YOR192C 1800 nt8.4□□□□□ -1.07
RPD3P32561 PEX25YPL112C 1185 nt8.39□□□□□ -1.07
RPD3P32561 YNL115CYNL115C 1935 nt8.39□□□□□ -1.07
RPD3P32561 YNL024CYNL024C 741 nt8.37□□□□□ -1.07
RPD3P32561 ACO2YJL200C 2370 nt8.37□□□□□ -1.07
RPD3P32561 GAP1YKR039W 1809 nt8.36□□□□□ -1.07
RPD3P32561 FTH1YBR207W 1398 nt8.35□□□□□ -1.07
RPD3P32561 SGT2YOR007C 1041 nt8.35□□□□□ -1.07
RPD3P32561 ILV3YJR016C 1758 nt8.33□□□□□ -1.08
RPD3P32561 YFL066CYFL066C 1179 nt8.33□□□□□ -1.08
RPD3P32561 NAS6YGR232W 687 nt8.32□□□□□ -1.08
RPD3P32561 LSC2YGR244C 1284 nt8.32□□□□□ -1.08
RPD3P32561 NAT4YMR069W 858 nt8.32□□□□□ -1.08
RPD3P32561 VPS75YNL246W 795 nt8.32□□□□□ -1.08
RPD3P32561 PAM17YKR065C 594 nt8.31□□□□□ -1.08
RPD3P32561 YOR325WYOR325W 474 nt8.31□□□□□ -1.08
RPD3P32561 YMR209CYMR209C 1374 nt8.3□□□□□ -1.08
RPD3P32561 ABZ2YMR289W 1125 nt8.29□□□□□ -1.08
RPD3P32561 NRT1YOR071C 1797 nt8.29□□□□□ -1.08
RPD3P32561 PRO1YDR300C 1287 nt8.27□□□□□ -1.09
RPD3P32561 HIS2YFR025C 1008 nt8.27□□□□□ -1.09
RPD3P32561 TIR3YIL011W 810 nt8.27□□□□□ -1.09
RPD3P32561 HXT1YHR094C 1713 nt8.26□□□□□ -1.09
RPD3P32561 DBP1YPL119C 1854 nt8.26□□□□□ -1.09
RPD3P32561 YIL100C-AYIL100C-A 339 nt8.26□□□□□ -1.09
RPD3P32561 MAS1YLR163C 1389 nt8.25□□□□□ -1.09
RPD3P32561 COQ8YGL119W 1506 nt8.24□□□□□ -1.09
RPD3P32561 SHY1YGR112W 1170 nt8.24□□□□□ -1.09
RPD3P32561 SHH4YLR164W 507 nt8.24□□□□□ -1.09
RPD3P32561 YTH1YPR107C 627 nt8.24□□□□□ -1.09
RPD3P32561 PAU7YAR020C 168 nt8.22□□□□□ -1.09
RPD3P32561 UGP1YKL035W 1500 nt8.22□□□□□ -1.09
RPD3P32561 FAF1YIL019W 1041 nt8.21□□□□□ -1.1
RPD3P32561 MSF1YPR047W 1410 nt8.2□□□□□ -1.1
RPD3P32561 POM34YLR018C 900 nt8.2□□□□□ -1.1
RPD3P32561 FRA1YLL029W 2250 nt8.19□□□□□ -1.1
RPD3P32561 ATG15YCR068W 1563 nt8.19□□□□□ -1.1
RPD3P32561 OPI10YOL032W 741 nt8.19□□□□□ -1.1
RPD3P32561 ARO8YGL202W 1503 nt8.19□□□□□ -1.1
RPD3P32561 DIF1YLR437C 402 nt8.18□□□□□ -1.1
RPD3P32561 YNL067W-AYNL067W-A 147 nt8.18□□□□□ -1.1
RPD3P32561 CWC15YDR163W 528 nt8.17□□□□□ -1.1
RPD3P32561 THI74YDR438W 1113 nt8.16□□□□□ -1.1
RPD3P32561 CCT2YIL142W 1584 nt8.15□□□□□ -1.1
RPD3P32561 MIR1YJR077C 936 nt8.15□□□□□ -1.1
RPD3P32561 PUS5YLR165C 765 nt8.15□□□□□ -1.1
RPD3P32561 KES1YPL145C 1305 nt8.14□□□□□ -1.11
RPD3P32561 MRP20YDR405W 792 nt8.14□□□□□ -1.11
RPD3P32561 FHN1YGR131W 525 nt8.14□□□□□ -1.11
RPD3P32561 BET2YPR176C 978 nt8.14□□□□□ -1.11
Retrieved 100 of 7,029 protein–RNA pairs in 31.2 ms