Protein–RNA interactions for Protein: O60575

SPINK4, Serine protease inhibitor Kazal-type 4, humanhuman

Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPINK4O60575 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SPINK4O60575 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SPINK4O60575 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPINK4O60575 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPINK4O60575 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SPINK4O60575 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SPINK4O60575 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC20.68■□□□□ 0.9
SPINK4O60575 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SPINK4O60575 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SPINK4O60575 AC006077.2-201ENST00000623591 457 ntBASIC20.67■□□□□ 0.9
SPINK4O60575 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
SPINK4O60575 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPINK4O60575 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPINK4O60575 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
SPINK4O60575 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SPINK4O60575 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPINK4O60575 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SPINK4O60575 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
SPINK4O60575 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SPINK4O60575 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SPINK4O60575 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SPINK4O60575 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SPINK4O60575 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC20.63■□□□□ 0.89
SPINK4O60575 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SPINK4O60575 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC20.63■□□□□ 0.89
SPINK4O60575 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC20.62■□□□□ 0.89
SPINK4O60575 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SPINK4O60575 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SPINK4O60575 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SPINK4O60575 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SPINK4O60575 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SPINK4O60575 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SPINK4O60575 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SPINK4O60575 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SPINK4O60575 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SPINK4O60575 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SPINK4O60575 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SPINK4O60575 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SPINK4O60575 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC20.56■□□□□ 0.88
SPINK4O60575 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SPINK4O60575 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SPINK4O60575 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC20.55■□□□□ 0.88
SPINK4O60575 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SPINK4O60575 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SPINK4O60575 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
SPINK4O60575 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SPINK4O60575 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SPINK4O60575 ZNRF2P1-201ENST00000441407 443 ntBASIC20.53■□□□□ 0.88
SPINK4O60575 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SPINK4O60575 AC120057.4-201ENST00000624722 1615 ntBASIC20.52■□□□□ 0.88
SPINK4O60575 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SPINK4O60575 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPINK4O60575 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC20.51■□□□□ 0.87
SPINK4O60575 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPINK4O60575 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPINK4O60575 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SPINK4O60575 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC20.5■□□□□ 0.87
SPINK4O60575 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SPINK4O60575 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SPINK4O60575 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
SPINK4O60575 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SPINK4O60575 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SPINK4O60575 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
SPINK4O60575 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SPINK4O60575 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
SPINK4O60575 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC20.47■□□□□ 0.87
SPINK4O60575 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SPINK4O60575 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SPINK4O60575 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SPINK4O60575 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SPINK4O60575 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SPINK4O60575 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SPINK4O60575 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SPINK4O60575 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SPINK4O60575 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SPINK4O60575 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SPINK4O60575 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC20.42■□□□□ 0.86
SPINK4O60575 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
SPINK4O60575 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
SPINK4O60575 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
SPINK4O60575 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SPINK4O60575 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
SPINK4O60575 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC20.39■□□□□ 0.86
SPINK4O60575 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
SPINK4O60575 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
SPINK4O60575 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SPINK4O60575 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SPINK4O60575 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC20.38■□□□□ 0.85
SPINK4O60575 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC20.38■□□□□ 0.85
SPINK4O60575 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SPINK4O60575 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC20.38■□□□□ 0.85
SPINK4O60575 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
SPINK4O60575 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SPINK4O60575 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SPINK4O60575 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
SPINK4O60575 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SPINK4O60575 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
SPINK4O60575 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SPINK4O60575 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.34■□□□□ 0.85
SPINK4O60575 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms