Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PAX4O43316 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC19.19■□□□□ 0.66
PAX4O43316 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PAX4O43316 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC19.18■□□□□ 0.66
PAX4O43316 ST7-205ENST00000393446 2114 ntTSL 5 BASIC19.18■□□□□ 0.66
PAX4O43316 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
PAX4O43316 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
PAX4O43316 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PAX4O43316 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC19.17■□□□□ 0.66
PAX4O43316 SETD8P1-201ENST00000623146 1180 ntBASIC19.17■□□□□ 0.66
PAX4O43316 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PAX4O43316 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PAX4O43316 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PAX4O43316 ST7-202ENST00000323984 2142 ntTSL 5 BASIC19.15■□□□□ 0.66
PAX4O43316 ST7-207ENST00000393449 2127 ntTSL 5 BASIC19.15■□□□□ 0.66
PAX4O43316 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PAX4O43316 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PAX4O43316 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PAX4O43316 AL133380.1-201ENST00000506013 324 ntBASIC19.12■□□□□ 0.65
PAX4O43316 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PAX4O43316 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
PAX4O43316 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PAX4O43316 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PAX4O43316 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PAX4O43316 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PAX4O43316 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PAX4O43316 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
PAX4O43316 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
PAX4O43316 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
PAX4O43316 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PAX4O43316 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PAX4O43316 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
PAX4O43316 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PAX4O43316 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
PAX4O43316 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PAX4O43316 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
PAX4O43316 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PAX4O43316 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PAX4O43316 AC097358.2-201ENST00000607541 1159 ntBASIC19.03■□□□□ 0.64
PAX4O43316 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PAX4O43316 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC19.02■□□□□ 0.64
PAX4O43316 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC19.01■□□□□ 0.63
PAX4O43316 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PAX4O43316 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC19■□□□□ 0.63
PAX4O43316 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
PAX4O43316 WASH5P-204ENST00000632292 975 ntBASIC19■□□□□ 0.63
PAX4O43316 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC19■□□□□ 0.63
PAX4O43316 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC19■□□□□ 0.63
PAX4O43316 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
PAX4O43316 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC19■□□□□ 0.63
PAX4O43316 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC18.99■□□□□ 0.63
PAX4O43316 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC18.98■□□□□ 0.63
PAX4O43316 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PAX4O43316 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
PAX4O43316 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PAX4O43316 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PAX4O43316 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PAX4O43316 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
PAX4O43316 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PAX4O43316 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PAX4O43316 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PAX4O43316 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC18.94■□□□□ 0.62
PAX4O43316 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PAX4O43316 AC136428.2-201ENST00000563187 214 ntBASIC18.94■□□□□ 0.62
PAX4O43316 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
PAX4O43316 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC18.94■□□□□ 0.62
PAX4O43316 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PAX4O43316 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
PAX4O43316 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
PAX4O43316 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC18.93■□□□□ 0.62
PAX4O43316 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PAX4O43316 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PAX4O43316 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC18.91■□□□□ 0.62
PAX4O43316 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PAX4O43316 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC18.91■□□□□ 0.62
PAX4O43316 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC18.9■□□□□ 0.62
PAX4O43316 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PAX4O43316 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
PAX4O43316 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PAX4O43316 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PAX4O43316 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC18.88■□□□□ 0.61
PAX4O43316 AL391121.1-201ENST00000607967 1349 ntBASIC18.88■□□□□ 0.61
PAX4O43316 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC18.88■□□□□ 0.61
PAX4O43316 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PAX4O43316 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PAX4O43316 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PAX4O43316 EBPL-202ENST00000378268 680 ntTSL 3 BASIC18.87■□□□□ 0.61
PAX4O43316 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC18.87■□□□□ 0.61
PAX4O43316 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC18.87■□□□□ 0.61
PAX4O43316 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
PAX4O43316 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PAX4O43316 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PAX4O43316 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PAX4O43316 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PAX4O43316 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PAX4O43316 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PAX4O43316 AL161658.1-201ENST00000623641 1967 ntBASIC18.85■□□□□ 0.61
PAX4O43316 CAHM-201ENST00000604200 896 ntBASIC18.85■□□□□ 0.61
PAX4O43316 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC18.85■□□□□ 0.61
PAX4O43316 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms