Protein–RNA interactions for Protein: O15018

PDZD2, PDZ domain-containing protein 2, humanhuman

Predictions only

Length 2,839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD2O15018 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PDZD2O15018 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PDZD2O15018 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PDZD2O15018 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
PDZD2O15018 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PDZD2O15018 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
PDZD2O15018 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PDZD2O15018 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
PDZD2O15018 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PDZD2O15018 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
PDZD2O15018 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC23.64■■□□□ 1.37
PDZD2O15018 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC23.63■■□□□ 1.37
PDZD2O15018 AC016575.1-201ENST00000607026 382 ntBASIC23.63■■□□□ 1.37
PDZD2O15018 ILK-212ENST00000532063 1617 ntTSL 2 BASIC23.63■■□□□ 1.37
PDZD2O15018 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
PDZD2O15018 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
PDZD2O15018 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PDZD2O15018 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PDZD2O15018 DUX4L29-201ENST00000425409 679 ntBASIC23.6■■□□□ 1.37
PDZD2O15018 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC23.59■■□□□ 1.37
PDZD2O15018 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PDZD2O15018 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC23.58■■□□□ 1.36
PDZD2O15018 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC23.56■■□□□ 1.36
PDZD2O15018 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PDZD2O15018 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
PDZD2O15018 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
PDZD2O15018 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.53■■□□□ 1.36
PDZD2O15018 CR559946.2-201ENST00000623684 991 ntBASIC23.53■■□□□ 1.36
PDZD2O15018 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.52■■□□□ 1.36
PDZD2O15018 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC23.51■■□□□ 1.35
PDZD2O15018 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC23.51■■□□□ 1.35
PDZD2O15018 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC23.49■■□□□ 1.35
PDZD2O15018 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
PDZD2O15018 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
PDZD2O15018 AC021231.2-201ENST00000594613 730 ntBASIC23.48■■□□□ 1.35
PDZD2O15018 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC23.46■■□□□ 1.35
PDZD2O15018 ABHD17AP3-201ENST00000503096 1137 ntBASIC23.46■■□□□ 1.35
PDZD2O15018 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.46■■□□□ 1.35
PDZD2O15018 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PDZD2O15018 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
PDZD2O15018 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.45■■□□□ 1.34
PDZD2O15018 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.44■■□□□ 1.34
PDZD2O15018 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PDZD2O15018 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PDZD2O15018 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
PDZD2O15018 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC23.43■■□□□ 1.34
PDZD2O15018 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC23.43■■□□□ 1.34
PDZD2O15018 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
PDZD2O15018 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PDZD2O15018 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PDZD2O15018 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
PDZD2O15018 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC23.4■■□□□ 1.34
PDZD2O15018 RPS2-209ENST00000529806 993 ntTSL 3 BASIC23.4■■□□□ 1.34
PDZD2O15018 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
PDZD2O15018 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC23.4■■□□□ 1.34
PDZD2O15018 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC23.4■■□□□ 1.34
PDZD2O15018 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
PDZD2O15018 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
PDZD2O15018 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PDZD2O15018 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC23.37■■□□□ 1.33
PDZD2O15018 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC23.36■■□□□ 1.33
PDZD2O15018 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.36■■□□□ 1.33
PDZD2O15018 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PDZD2O15018 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PDZD2O15018 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PDZD2O15018 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PDZD2O15018 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PDZD2O15018 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PDZD2O15018 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
PDZD2O15018 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PDZD2O15018 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PDZD2O15018 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
PDZD2O15018 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC23.29■■□□□ 1.32
PDZD2O15018 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
PDZD2O15018 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PDZD2O15018 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC23.28■■□□□ 1.32
PDZD2O15018 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PDZD2O15018 RARRES2P2-201ENST00000394842 485 ntBASIC23.27■■□□□ 1.32
PDZD2O15018 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC23.27■■□□□ 1.32
PDZD2O15018 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PDZD2O15018 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PDZD2O15018 DUX4L11-201ENST00000611504 1267 ntBASIC23.26■■□□□ 1.31
PDZD2O15018 DUX4L12-201ENST00000614593 1267 ntBASIC23.26■■□□□ 1.31
PDZD2O15018 DUX4L14-201ENST00000621227 1267 ntBASIC23.26■■□□□ 1.31
PDZD2O15018 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PDZD2O15018 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PDZD2O15018 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
PDZD2O15018 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PDZD2O15018 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PDZD2O15018 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PDZD2O15018 CIB2-204ENST00000557846 934 ntTSL 3 BASIC23.23■■□□□ 1.31
PDZD2O15018 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PDZD2O15018 LINC01971-201ENST00000617888 1048 ntBASIC23.22■■□□□ 1.31
PDZD2O15018 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC23.21■■□□□ 1.31
PDZD2O15018 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC23.21■■□□□ 1.31
PDZD2O15018 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC23.21■■□□□ 1.31
PDZD2O15018 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PDZD2O15018 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PDZD2O15018 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC23.19■■□□□ 1.3
PDZD2O15018 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms