Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC31.63■■■□□ 2.65
CCDC196A0A1B0GTZ2 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
CCDC196A0A1B0GTZ2 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
CCDC196A0A1B0GTZ2 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC31.62■■■□□ 2.65
CCDC196A0A1B0GTZ2 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC31.6■■■□□ 2.65
CCDC196A0A1B0GTZ2 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC31.6■■■□□ 2.65
CCDC196A0A1B0GTZ2 WASH5P-204ENST00000632292 975 ntBASIC31.59■■■□□ 2.65
CCDC196A0A1B0GTZ2 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
CCDC196A0A1B0GTZ2 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
CCDC196A0A1B0GTZ2 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
CCDC196A0A1B0GTZ2 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC31.56■■■□□ 2.64
CCDC196A0A1B0GTZ2 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC31.55■■■□□ 2.64
CCDC196A0A1B0GTZ2 AC097358.2-201ENST00000607541 1159 ntBASIC31.55■■■□□ 2.64
CCDC196A0A1B0GTZ2 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC31.54■■■□□ 2.64
CCDC196A0A1B0GTZ2 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
CCDC196A0A1B0GTZ2 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC31.53■■■□□ 2.64
CCDC196A0A1B0GTZ2 AC136428.2-201ENST00000563187 214 ntBASIC31.52■■■□□ 2.64
CCDC196A0A1B0GTZ2 ST7-205ENST00000393446 2114 ntTSL 5 BASIC31.51■■■□□ 2.64
CCDC196A0A1B0GTZ2 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
CCDC196A0A1B0GTZ2 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
CCDC196A0A1B0GTZ2 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
CCDC196A0A1B0GTZ2 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC31.48■■■□□ 2.63
CCDC196A0A1B0GTZ2 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC31.46■■■□□ 2.63
CCDC196A0A1B0GTZ2 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC31.46■■■□□ 2.63
CCDC196A0A1B0GTZ2 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC31.45■■■□□ 2.63
CCDC196A0A1B0GTZ2 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC31.45■■■□□ 2.62
CCDC196A0A1B0GTZ2 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC31.44■■■□□ 2.62
CCDC196A0A1B0GTZ2 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC31.44■■■□□ 2.62
CCDC196A0A1B0GTZ2 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
CCDC196A0A1B0GTZ2 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC31.43■■■□□ 2.62
CCDC196A0A1B0GTZ2 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC31.42■■■□□ 2.62
CCDC196A0A1B0GTZ2 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
CCDC196A0A1B0GTZ2 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CCDC196A0A1B0GTZ2 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC31.42■■■□□ 2.62
CCDC196A0A1B0GTZ2 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC31.42■■■□□ 2.62
CCDC196A0A1B0GTZ2 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CCDC196A0A1B0GTZ2 ST7-202ENST00000323984 2142 ntTSL 5 BASIC31.42■■■□□ 2.62
CCDC196A0A1B0GTZ2 ST7-207ENST00000393449 2127 ntTSL 5 BASIC31.42■■■□□ 2.62
CCDC196A0A1B0GTZ2 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
CCDC196A0A1B0GTZ2 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CCDC196A0A1B0GTZ2 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CCDC196A0A1B0GTZ2 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC31.4■■■□□ 2.62
CCDC196A0A1B0GTZ2 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC31.4■■■□□ 2.62
CCDC196A0A1B0GTZ2 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
CCDC196A0A1B0GTZ2 AL391121.1-201ENST00000607967 1349 ntBASIC31.39■■■□□ 2.62
CCDC196A0A1B0GTZ2 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CCDC196A0A1B0GTZ2 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CCDC196A0A1B0GTZ2 CAHM-201ENST00000604200 896 ntBASIC31.37■■■□□ 2.61
CCDC196A0A1B0GTZ2 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CCDC196A0A1B0GTZ2 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
CCDC196A0A1B0GTZ2 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC31.36■■■□□ 2.61
CCDC196A0A1B0GTZ2 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC31.36■■■□□ 2.61
CCDC196A0A1B0GTZ2 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC31.36■■■□□ 2.61
CCDC196A0A1B0GTZ2 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
CCDC196A0A1B0GTZ2 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
CCDC196A0A1B0GTZ2 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC31.35■■■□□ 2.61
CCDC196A0A1B0GTZ2 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC31.34■■■□□ 2.61
CCDC196A0A1B0GTZ2 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
CCDC196A0A1B0GTZ2 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC31.32■■■□□ 2.61
CCDC196A0A1B0GTZ2 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
CCDC196A0A1B0GTZ2 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC31.32■■■□□ 2.6
CCDC196A0A1B0GTZ2 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
CCDC196A0A1B0GTZ2 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
CCDC196A0A1B0GTZ2 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
CCDC196A0A1B0GTZ2 EBPL-202ENST00000378268 680 ntTSL 3 BASIC31.31■■■□□ 2.6
CCDC196A0A1B0GTZ2 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC31.31■■■□□ 2.6
CCDC196A0A1B0GTZ2 AL161658.1-201ENST00000623641 1967 ntBASIC31.3■■■□□ 2.6
CCDC196A0A1B0GTZ2 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
CCDC196A0A1B0GTZ2 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
CCDC196A0A1B0GTZ2 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CCDC196A0A1B0GTZ2 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
CCDC196A0A1B0GTZ2 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC31.26■■■□□ 2.59
CCDC196A0A1B0GTZ2 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC31.26■■■□□ 2.59
CCDC196A0A1B0GTZ2 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
CCDC196A0A1B0GTZ2 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC31.25■■■□□ 2.59
CCDC196A0A1B0GTZ2 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
CCDC196A0A1B0GTZ2 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CCDC196A0A1B0GTZ2 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC31.23■■■□□ 2.59
CCDC196A0A1B0GTZ2 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC31.23■■■□□ 2.59
CCDC196A0A1B0GTZ2 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CCDC196A0A1B0GTZ2 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC31.22■■■□□ 2.59
CCDC196A0A1B0GTZ2 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CCDC196A0A1B0GTZ2 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC31.21■■■□□ 2.59
CCDC196A0A1B0GTZ2 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC31.21■■■□□ 2.59
CCDC196A0A1B0GTZ2 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
CCDC196A0A1B0GTZ2 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC31.19■■■□□ 2.58
CCDC196A0A1B0GTZ2 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CCDC196A0A1B0GTZ2 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC31.19■■■□□ 2.58
CCDC196A0A1B0GTZ2 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CCDC196A0A1B0GTZ2 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC31.18■■■□□ 2.58
CCDC196A0A1B0GTZ2 DENR-202ENST00000455982 1052 ntTSL 5 BASIC31.18■■■□□ 2.58
CCDC196A0A1B0GTZ2 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CCDC196A0A1B0GTZ2 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
CCDC196A0A1B0GTZ2 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC31.16■■■□□ 2.58
CCDC196A0A1B0GTZ2 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC31.16■■■□□ 2.58
CCDC196A0A1B0GTZ2 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
CCDC196A0A1B0GTZ2 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
CCDC196A0A1B0GTZ2 SUZ12P1-203ENST00000578195 985 ntBASIC31.15■■■□□ 2.58
CCDC196A0A1B0GTZ2 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC31.14■■■□□ 2.58
CCDC196A0A1B0GTZ2 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms