Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRBV6-1A0A0K0K1D8 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRBV6-1A0A0K0K1D8 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRBV6-1A0A0K0K1D8 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRBV6-1A0A0K0K1D8 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC20.46■□□□□ 0.87
TRBV6-1A0A0K0K1D8 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
TRBV6-1A0A0K0K1D8 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRBV6-1A0A0K0K1D8 AL161658.1-201ENST00000623641 1967 ntBASIC20.46■□□□□ 0.87
TRBV6-1A0A0K0K1D8 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRBV6-1A0A0K0K1D8 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRBV6-1A0A0K0K1D8 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRBV6-1A0A0K0K1D8 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
TRBV6-1A0A0K0K1D8 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRBV6-1A0A0K0K1D8 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
TRBV6-1A0A0K0K1D8 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRBV6-1A0A0K0K1D8 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRBV6-1A0A0K0K1D8 MVK-208ENST00000539696 608 ntTSL 5 BASIC20.41■□□□□ 0.86
TRBV6-1A0A0K0K1D8 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
TRBV6-1A0A0K0K1D8 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRBV6-1A0A0K0K1D8 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRBV6-1A0A0K0K1D8 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRBV6-1A0A0K0K1D8 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRBV6-1A0A0K0K1D8 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRBV6-1A0A0K0K1D8 ST7-AS1-201ENST00000456775 1889 ntBASIC20.38■□□□□ 0.85
TRBV6-1A0A0K0K1D8 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRBV6-1A0A0K0K1D8 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRBV6-1A0A0K0K1D8 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC20.37■□□□□ 0.85
TRBV6-1A0A0K0K1D8 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRBV6-1A0A0K0K1D8 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC20.35■□□□□ 0.85
TRBV6-1A0A0K0K1D8 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRBV6-1A0A0K0K1D8 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
TRBV6-1A0A0K0K1D8 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRBV6-1A0A0K0K1D8 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRBV6-1A0A0K0K1D8 AC139426.1-201ENST00000568218 2529 ntBASIC20.33■□□□□ 0.85
TRBV6-1A0A0K0K1D8 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRBV6-1A0A0K0K1D8 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC20.31■□□□□ 0.84
TRBV6-1A0A0K0K1D8 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRBV6-1A0A0K0K1D8 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRBV6-1A0A0K0K1D8 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRBV6-1A0A0K0K1D8 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRBV6-1A0A0K0K1D8 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRBV6-1A0A0K0K1D8 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC20.3■□□□□ 0.84
TRBV6-1A0A0K0K1D8 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRBV6-1A0A0K0K1D8 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.29■□□□□ 0.84
TRBV6-1A0A0K0K1D8 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRBV6-1A0A0K0K1D8 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC20.28■□□□□ 0.84
TRBV6-1A0A0K0K1D8 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRBV6-1A0A0K0K1D8 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRBV6-1A0A0K0K1D8 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
TRBV6-1A0A0K0K1D8 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC20.25■□□□□ 0.83
TRBV6-1A0A0K0K1D8 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
TRBV6-1A0A0K0K1D8 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
TRBV6-1A0A0K0K1D8 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
TRBV6-1A0A0K0K1D8 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRBV6-1A0A0K0K1D8 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
TRBV6-1A0A0K0K1D8 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
TRBV6-1A0A0K0K1D8 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC20.23■□□□□ 0.83
TRBV6-1A0A0K0K1D8 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRBV6-1A0A0K0K1D8 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRBV6-1A0A0K0K1D8 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC20.22■□□□□ 0.83
TRBV6-1A0A0K0K1D8 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
TRBV6-1A0A0K0K1D8 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC20.21■□□□□ 0.83
TRBV6-1A0A0K0K1D8 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRBV6-1A0A0K0K1D8 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV6-1A0A0K0K1D8 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV6-1A0A0K0K1D8 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV6-1A0A0K0K1D8 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC20.2■□□□□ 0.82
TRBV6-1A0A0K0K1D8 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV6-1A0A0K0K1D8 AC142086.6-201ENST00000621154 1765 ntBASIC20.18■□□□□ 0.82
TRBV6-1A0A0K0K1D8 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRBV6-1A0A0K0K1D8 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRBV6-1A0A0K0K1D8 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRBV6-1A0A0K0K1D8 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRBV6-1A0A0K0K1D8 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRBV6-1A0A0K0K1D8 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC20.17■□□□□ 0.82
TRBV6-1A0A0K0K1D8 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRBV6-1A0A0K0K1D8 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRBV6-1A0A0K0K1D8 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRBV6-1A0A0K0K1D8 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC20.16■□□□□ 0.82
TRBV6-1A0A0K0K1D8 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRBV6-1A0A0K0K1D8 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.14■□□□□ 0.81
TRBV6-1A0A0K0K1D8 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
TRBV6-1A0A0K0K1D8 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRBV6-1A0A0K0K1D8 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRBV6-1A0A0K0K1D8 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRBV6-1A0A0K0K1D8 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
TRBV6-1A0A0K0K1D8 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRBV6-1A0A0K0K1D8 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRBV6-1A0A0K0K1D8 AL135925.1-201ENST00000605920 1701 ntBASIC20.12■□□□□ 0.81
TRBV6-1A0A0K0K1D8 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRBV6-1A0A0K0K1D8 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TRBV6-1A0A0K0K1D8 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRBV6-1A0A0K0K1D8 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRBV6-1A0A0K0K1D8 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.11■□□□□ 0.81
TRBV6-1A0A0K0K1D8 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
TRBV6-1A0A0K0K1D8 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRBV6-1A0A0K0K1D8 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRBV6-1A0A0K0K1D8 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRBV6-1A0A0K0K1D8 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRBV6-1A0A0K0K1D8 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms