Protein–RNA interactions for Protein: A0A0J9YX20

TRBV7-6, T-cell receptor beta variable 7-6 (Fragment), humanhuman

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-6A0A0J9YX20 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC17.23■□□□□ 0.35
TRBV7-6A0A0J9YX20 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV7-6A0A0J9YX20 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
TRBV7-6A0A0J9YX20 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV7-6A0A0J9YX20 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV7-6A0A0J9YX20 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV7-6A0A0J9YX20 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
TRBV7-6A0A0J9YX20 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
TRBV7-6A0A0J9YX20 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV7-6A0A0J9YX20 SHF-206ENST00000560471 2499 ntTSL 5 BASIC17.14■□□□□ 0.34
TRBV7-6A0A0J9YX20 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV7-6A0A0J9YX20 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV7-6A0A0J9YX20 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC17.13■□□□□ 0.33
TRBV7-6A0A0J9YX20 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC17.13■□□□□ 0.33
TRBV7-6A0A0J9YX20 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV7-6A0A0J9YX20 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC17.12■□□□□ 0.33
TRBV7-6A0A0J9YX20 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
TRBV7-6A0A0J9YX20 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV7-6A0A0J9YX20 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TRBV7-6A0A0J9YX20 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TRBV7-6A0A0J9YX20 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
TRBV7-6A0A0J9YX20 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
TRBV7-6A0A0J9YX20 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV7-6A0A0J9YX20 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV7-6A0A0J9YX20 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV7-6A0A0J9YX20 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TRBV7-6A0A0J9YX20 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRBV7-6A0A0J9YX20 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV7-6A0A0J9YX20 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV7-6A0A0J9YX20 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV7-6A0A0J9YX20 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV7-6A0A0J9YX20 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV7-6A0A0J9YX20 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV7-6A0A0J9YX20 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV7-6A0A0J9YX20 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC17.07■□□□□ 0.32
TRBV7-6A0A0J9YX20 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV7-6A0A0J9YX20 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
TRBV7-6A0A0J9YX20 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV7-6A0A0J9YX20 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV7-6A0A0J9YX20 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV7-6A0A0J9YX20 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV7-6A0A0J9YX20 ST7-AS1-201ENST00000456775 1889 ntBASIC17.03■□□□□ 0.32
TRBV7-6A0A0J9YX20 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV7-6A0A0J9YX20 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC17.01■□□□□ 0.31
TRBV7-6A0A0J9YX20 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV7-6A0A0J9YX20 MVK-208ENST00000539696 608 ntTSL 5 BASIC17■□□□□ 0.31
TRBV7-6A0A0J9YX20 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC17■□□□□ 0.31
TRBV7-6A0A0J9YX20 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV7-6A0A0J9YX20 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC16.99■□□□□ 0.31
TRBV7-6A0A0J9YX20 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV7-6A0A0J9YX20 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV7-6A0A0J9YX20 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV7-6A0A0J9YX20 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
TRBV7-6A0A0J9YX20 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV7-6A0A0J9YX20 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV7-6A0A0J9YX20 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV7-6A0A0J9YX20 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC16.98■□□□□ 0.31
TRBV7-6A0A0J9YX20 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
TRBV7-6A0A0J9YX20 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
TRBV7-6A0A0J9YX20 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV7-6A0A0J9YX20 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC16.97■□□□□ 0.31
TRBV7-6A0A0J9YX20 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC16.96■□□□□ 0.31
TRBV7-6A0A0J9YX20 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC16.96■□□□□ 0.3
TRBV7-6A0A0J9YX20 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV7-6A0A0J9YX20 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC16.95■□□□□ 0.3
TRBV7-6A0A0J9YX20 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV7-6A0A0J9YX20 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TRBV7-6A0A0J9YX20 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC16.94■□□□□ 0.3
TRBV7-6A0A0J9YX20 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV7-6A0A0J9YX20 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV7-6A0A0J9YX20 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV7-6A0A0J9YX20 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV7-6A0A0J9YX20 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV7-6A0A0J9YX20 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
TRBV7-6A0A0J9YX20 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV7-6A0A0J9YX20 AC142086.6-201ENST00000621154 1765 ntBASIC16.92■□□□□ 0.3
TRBV7-6A0A0J9YX20 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV7-6A0A0J9YX20 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV7-6A0A0J9YX20 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TRBV7-6A0A0J9YX20 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV7-6A0A0J9YX20 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV7-6A0A0J9YX20 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV7-6A0A0J9YX20 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV7-6A0A0J9YX20 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV7-6A0A0J9YX20 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC16.9■□□□□ 0.3
TRBV7-6A0A0J9YX20 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
TRBV7-6A0A0J9YX20 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TRBV7-6A0A0J9YX20 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV7-6A0A0J9YX20 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC16.89■□□□□ 0.29
TRBV7-6A0A0J9YX20 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TRBV7-6A0A0J9YX20 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV7-6A0A0J9YX20 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
TRBV7-6A0A0J9YX20 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV7-6A0A0J9YX20 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV7-6A0A0J9YX20 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV7-6A0A0J9YX20 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV7-6A0A0J9YX20 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TRBV7-6A0A0J9YX20 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV7-6A0A0J9YX20 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
TRBV7-6A0A0J9YX20 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms