Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
TRAV8-6A0A0B4J262 ABCB10P1-201ENST00000614297 2181 ntBASIC19.64■□□□□ 0.73
TRAV8-6A0A0B4J262 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV8-6A0A0B4J262 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV8-6A0A0B4J262 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV8-6A0A0B4J262 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV8-6A0A0B4J262 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV8-6A0A0B4J262 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV8-6A0A0B4J262 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV8-6A0A0B4J262 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV8-6A0A0B4J262 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV8-6A0A0B4J262 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRAV8-6A0A0B4J262 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRAV8-6A0A0B4J262 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRAV8-6A0A0B4J262 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRAV8-6A0A0B4J262 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV8-6A0A0B4J262 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV8-6A0A0B4J262 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV8-6A0A0B4J262 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV8-6A0A0B4J262 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV8-6A0A0B4J262 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV8-6A0A0B4J262 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV8-6A0A0B4J262 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
TRAV8-6A0A0B4J262 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV8-6A0A0B4J262 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV8-6A0A0B4J262 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV8-6A0A0B4J262 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC19.54■□□□□ 0.72
TRAV8-6A0A0B4J262 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
TRAV8-6A0A0B4J262 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV8-6A0A0B4J262 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC19.53■□□□□ 0.72
TRAV8-6A0A0B4J262 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC19.52■□□□□ 0.72
TRAV8-6A0A0B4J262 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV8-6A0A0B4J262 AP002365.1-201ENST00000603448 772 ntBASIC19.51■□□□□ 0.71
TRAV8-6A0A0B4J262 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV8-6A0A0B4J262 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV8-6A0A0B4J262 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV8-6A0A0B4J262 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV8-6A0A0B4J262 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC19.5■□□□□ 0.71
TRAV8-6A0A0B4J262 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
TRAV8-6A0A0B4J262 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV8-6A0A0B4J262 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV8-6A0A0B4J262 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV8-6A0A0B4J262 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV8-6A0A0B4J262 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV8-6A0A0B4J262 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV8-6A0A0B4J262 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV8-6A0A0B4J262 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV8-6A0A0B4J262 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC19.45■□□□□ 0.7
TRAV8-6A0A0B4J262 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC19.45■□□□□ 0.7
TRAV8-6A0A0B4J262 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
TRAV8-6A0A0B4J262 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV8-6A0A0B4J262 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV8-6A0A0B4J262 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV8-6A0A0B4J262 DYNLL1-208ENST00000550178 581 ntBASIC19.44■□□□□ 0.7
TRAV8-6A0A0B4J262 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV8-6A0A0B4J262 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC19.43■□□□□ 0.7
TRAV8-6A0A0B4J262 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV8-6A0A0B4J262 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV8-6A0A0B4J262 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC19.42■□□□□ 0.7
TRAV8-6A0A0B4J262 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV8-6A0A0B4J262 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV8-6A0A0B4J262 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV8-6A0A0B4J262 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV8-6A0A0B4J262 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV8-6A0A0B4J262 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV8-6A0A0B4J262 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV8-6A0A0B4J262 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV8-6A0A0B4J262 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC19.4■□□□□ 0.7
TRAV8-6A0A0B4J262 MVK-208ENST00000539696 608 ntTSL 5 BASIC19.4■□□□□ 0.7
TRAV8-6A0A0B4J262 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC19.4■□□□□ 0.7
TRAV8-6A0A0B4J262 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
TRAV8-6A0A0B4J262 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV8-6A0A0B4J262 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV8-6A0A0B4J262 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV8-6A0A0B4J262 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV8-6A0A0B4J262 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV8-6A0A0B4J262 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.38■□□□□ 0.69
TRAV8-6A0A0B4J262 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
TRAV8-6A0A0B4J262 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV8-6A0A0B4J262 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV8-6A0A0B4J262 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
TRAV8-6A0A0B4J262 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV8-6A0A0B4J262 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV8-6A0A0B4J262 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV8-6A0A0B4J262 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV8-6A0A0B4J262 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
TRAV8-6A0A0B4J262 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.35■□□□□ 0.69
TRAV8-6A0A0B4J262 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV8-6A0A0B4J262 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC19.34■□□□□ 0.69
TRAV8-6A0A0B4J262 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV8-6A0A0B4J262 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV8-6A0A0B4J262 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV8-6A0A0B4J262 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV8-6A0A0B4J262 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
TRAV8-6A0A0B4J262 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV8-6A0A0B4J262 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV8-6A0A0B4J262 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
TRAV8-6A0A0B4J262 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAV8-6A0A0B4J262 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV8-6A0A0B4J262 EBPL-203ENST00000378270 579 ntTSL 2 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms