Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 ATP1A1-201ENST00000295598 3654 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
P04436 AC022497.1-201ENST00000624916 3691 ntBASIC11.21□□□□□ -0.61
P04436 HPSE2-201ENST00000370546 1849 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
P04436 DRAM1-201ENST00000258534 3519 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
P04436 HYPK-203ENST00000458412 1712 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
P04436 SLC9A3P1-201ENST00000426317 1685 ntBASIC11.21□□□□□ -0.61
P04436 PPIL2-201ENST00000335025 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
P04436 FERMT2-202ENST00000343279 3247 ntTSL 5 BASIC11.21□□□□□ -0.61
P04436 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
P04436 TRIM25-202ENST00000537230 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
P04436 MADD-209ENST00000406482 5614 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
P04436 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC11.21□□□□□ -0.61
P04436 AC092295.2-201ENST00000592087 1392 ntBASIC11.21□□□□□ -0.61
P04436 PID1-202ENST00000392054 2745 ntTSL 2 BASIC11.21□□□□□ -0.61
P04436 MINK1-203ENST00000453408 3939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
P04436 HIF3A-204ENST00000300862 2551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
P04436 CCL24-201ENST00000222902 582 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
P04436 SPACA5-201ENST00000304355 648 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
P04436 RPS6-201ENST00000315377 863 ntTSL 3 BASIC11.21□□□□□ -0.61
P04436 RN7SKP20-201ENST00000362752 313 ntBASIC11.21□□□□□ -0.61
P04436 TRAF3IP2-206ENST00000368735 903 ntTSL 2 BASIC11.21□□□□□ -0.61
P04436 ARF1P2-201ENST00000392493 538 ntBASIC11.21□□□□□ -0.61
P04436 RPL14-203ENST00000416518 812 ntTSL 3 BASIC11.21□□□□□ -0.61
P04436 LINC01135-201ENST00000419531 996 ntTSL 4 BASIC11.21□□□□□ -0.61
P04436 HNRNPA1P68-201ENST00000425806 979 ntBASIC11.21□□□□□ -0.61
P04436 PPIEL-201ENST00000427240 813 ntBASIC11.21□□□□□ -0.61
P04436 MED15P7-201ENST00000435410 822 ntBASIC11.21□□□□□ -0.61
P04436 HS1BP3-IT1-201ENST00000449391 600 ntTSL 2 BASIC11.21□□□□□ -0.61
P04436 CDHR4-205ENST00000487256 1017 ntTSL 5 BASIC11.21□□□□□ -0.61
P04436 HNRNPA3P13-201ENST00000512222 1122 ntBASIC11.21□□□□□ -0.61
P04436 RNF139-AS1-202ENST00000519861 359 ntTSL 3 BASIC11.21□□□□□ -0.61
P04436 HNRNPA1P72-201ENST00000529511 967 ntBASIC11.21□□□□□ -0.61
P04436 PHLDB1-217ENST00000530708 874 ntTSL 5 BASIC11.21□□□□□ -0.61
P04436 AAMDC-210ENST00000532481 690 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
P04436 AC010547.1-202ENST00000567341 230 ntTSL 2 BASIC11.21□□□□□ -0.61
P04436 AC004134.1-201ENST00000587835 225 ntBASIC11.21□□□□□ -0.61
P04436 AC048380.1-201ENST00000589818 465 ntTSL 3 BASIC11.21□□□□□ -0.61
P04436 IFI27-212ENST00000618863 505 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
P04436 pRNA.4-201ENST00000620973 89 ntBASIC11.21□□□□□ -0.61
P04436 AC130469.2-201ENST00000625112 1092 ntBASIC11.21□□□□□ -0.61
P04436 LAMTOR5-AS1-234ENST00000625584 508 ntTSL 5 BASIC11.21□□□□□ -0.61
P04436 UBA3-212ENST00000630585 390 ntTSL 4 BASIC11.21□□□□□ -0.61
P04436 PRSS2-206ENST00000633969 852 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
P04436 AL513478.3-201ENST00000641038 1095 ntBASIC11.21□□□□□ -0.61
P04436 AC008158.1-201ENST00000578759 3668 ntBASIC11.21□□□□□ -0.61
P04436 ZNF483-203ENST00000358151 2433 ntTSL 2 BASIC11.21□□□□□ -0.61
P04436 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC11.21□□□□□ -0.62
P04436 NXPE3-205ENST00000491511 8074 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
P04436 PIK3R3-201ENST00000262741 5609 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
P04436 A1CF-203ENST00000373995 2211 ntTSL 2 BASIC11.21□□□□□ -0.62
P04436 DDX25-201ENST00000263576 7555 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
P04436 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC11.21□□□□□ -0.62
P04436 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
P04436 NCBP2L-202ENST00000639756 1953 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
P04436 NAV1-203ENST00000367302 9685 ntTSL 5 BASIC11.21□□□□□ -0.62
P04436 KIR3DL2-202ENST00000326321 1877 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
P04436 KLHL30-201ENST00000409223 3726 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
P04436 DGKZP1-201ENST00000378718 2776 ntBASIC11.21□□□□□ -0.62
P04436 CELF2-210ENST00000631816 1803 ntTSL 2 BASIC11.21□□□□□ -0.62
P04436 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
P04436 AC009927.1-201ENST00000510501 1779 ntBASIC11.21□□□□□ -0.62
P04436 ARSG-202ENST00000452479 1733 ntTSL 5 BASIC11.21□□□□□ -0.62
P04436 DDX27-206ENST00000618172 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
P04436 IGF2BP2-204ENST00000457616 3426 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
P04436 TIFAB-201ENST00000537858 5923 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
P04436 GPT2-202ENST00000440783 4228 ntTSL 2 BASIC11.2□□□□□ -0.62
P04436 ADNP-203ENST00000396029 6261 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
P04436 GREB1-204ENST00000381486 8484 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
P04436 SCN8A-208ENST00000599343 5976 ntAPPRIS ALT1 TSL 5 BASIC11.2□□□□□ -0.62
P04436 AC068669.1-201ENST00000623793 2228 ntBASIC11.2□□□□□ -0.62
P04436 ADAM32-206ENST00000519315 2168 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
P04436 ARHGEF9-221ENST00000635967 2179 ntTSL 5 BASIC11.2□□□□□ -0.62
P04436 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC11.2□□□□□ -0.62
P04436 TROVE2-206ENST00000400968 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
P04436 AL162391.1-201ENST00000419853 2102 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
P04436 RAB10-201ENST00000264710 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
P04436 ATP2C2-202ENST00000416219 3472 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
P04436 THRAP3-203ENST00000469141 3339 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
P04436 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
P04436 NBR2-202ENST00000460115 1344 ntTSL 2 BASIC11.2□□□□□ -0.62
P04436 NDRG4-254ENST00000569923 1312 ntTSL 2 BASIC11.2□□□□□ -0.62
P04436 C17orf64-201ENST00000269127 950 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
P04436 SNX15-201ENST00000352068 771 ntTSL 5 BASIC11.2□□□□□ -0.62
P04436 LINC01556-201ENST00000377186 466 ntTSL 2 BASIC11.2□□□□□ -0.62
P04436 RNF7-202ENST00000393000 805 ntTSL 2 BASIC11.2□□□□□ -0.62
P04436 AC092587.1-201ENST00000410042 669 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
P04436 AC069277.1-201ENST00000433639 1083 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
P04436 AL354676.1-201ENST00000458047 368 ntBASIC11.2□□□□□ -0.62
P04436 RN7SL225P-201ENST00000464648 298 ntBASIC11.2□□□□□ -0.62
P04436 AC108724.1-201ENST00000481669 352 ntBASIC11.2□□□□□ -0.62
P04436 RN7SL265P-201ENST00000486808 300 ntBASIC11.2□□□□□ -0.62
P04436 CACNA1C-IT3-201ENST00000542680 622 ntTSL 3 BASIC11.2□□□□□ -0.62
P04436 NEMF-210ENST00000556672 590 ntTSL 2 BASIC11.2□□□□□ -0.62
P04436 HSBP1-204ENST00000570259 1020 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
P04436 AC015563.2-201ENST00000579580 772 ntTSL 3 BASIC11.2□□□□□ -0.62
P04436 RN7SL300P-201ENST00000582522 318 ntBASIC11.2□□□□□ -0.62
P04436 AC002347.2-201ENST00000584139 171 ntTSL 3 BASIC11.2□□□□□ -0.62
P04436 CNDP2-228ENST00000584768 897 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
P04436 AL353997.3-201ENST00000586597 589 ntBASIC11.2□□□□□ -0.62
P04436 AC018695.2-201ENST00000602789 498 ntTSL 5 BASIC11.2□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms