Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 AC139491.6-202ENST00000637171 2077 ntBASIC12.19□□□□□ -0.46
NCDNQ9UBB6 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
NCDNQ9UBB6 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NCDNQ9UBB6 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NCDNQ9UBB6 TRPM8-202ENST00000355722 904 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NCDNQ9UBB6 AL021068.1-201ENST00000392097 911 ntBASIC12.19□□□□□ -0.46
NCDNQ9UBB6 KRTAP10-6-201ENST00000400368 1238 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
NCDNQ9UBB6 CST13P-202ENST00000400563 1157 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NCDNQ9UBB6 PGAM1P7-201ENST00000413837 737 ntBASIC12.19□□□□□ -0.46
NCDNQ9UBB6 ALG1L10P-201ENST00000437882 424 ntBASIC12.19□□□□□ -0.46
NCDNQ9UBB6 AL450063.1-201ENST00000441775 244 ntBASIC12.19□□□□□ -0.46
NCDNQ9UBB6 AL772155.2-201ENST00000443910 472 ntBASIC12.19□□□□□ -0.46
NCDNQ9UBB6 AL513366.1-201ENST00000456427 1248 ntBASIC12.19□□□□□ -0.46
NCDNQ9UBB6 IL2RG-204ENST00000456850 540 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NCDNQ9UBB6 AL354676.1-201ENST00000458047 368 ntBASIC12.19□□□□□ -0.46
NCDNQ9UBB6 LINC01140-203ENST00000469312 1298 ntTSL 5 BASIC12.19□□□□□ -0.46
NCDNQ9UBB6 RN7SL553P-201ENST00000482215 298 ntBASIC12.19□□□□□ -0.46
NCDNQ9UBB6 CETN3-203ENST00000522083 1026 ntTSL 2 BASIC12.19□□□□□ -0.46
NCDNQ9UBB6 CETN3-204ENST00000522565 867 ntTSL 2 BASIC12.19□□□□□ -0.46
NCDNQ9UBB6 RAB30-203ENST00000525117 937 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NCDNQ9UBB6 RAD51-AS1-203ENST00000533146 718 ntTSL 3 BASIC12.19□□□□□ -0.46
NCDNQ9UBB6 AC068722.1-201ENST00000560705 861 ntTSL 3 BASIC12.19□□□□□ -0.46
NCDNQ9UBB6 AC113208.2-201ENST00000565381 608 ntBASIC12.19□□□□□ -0.46
NCDNQ9UBB6 AC009166.1-201ENST00000570060 487 ntTSL 2 BASIC12.19□□□□□ -0.46
NCDNQ9UBB6 AC091027.1-201ENST00000580639 523 ntTSL 3 BASIC12.19□□□□□ -0.46
NCDNQ9UBB6 RN7SL491P-201ENST00000584748 269 ntBASIC12.19□□□□□ -0.46
NCDNQ9UBB6 AC104365.2-201ENST00000586383 740 ntTSL 3 BASIC12.19□□□□□ -0.46
NCDNQ9UBB6 AFMID-208ENST00000588800 647 ntTSL 2 BASIC12.19□□□□□ -0.46
NCDNQ9UBB6 AP001059.2-201ENST00000620163 449 ntBASIC12.19□□□□□ -0.46
NCDNQ9UBB6 NEAT1_1.1-201ENST00000620348 120 ntBASIC12.19□□□□□ -0.46
NCDNQ9UBB6 AC093323.2-201ENST00000632154 976 ntBASIC12.19□□□□□ -0.46
NCDNQ9UBB6 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
NCDNQ9UBB6 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC12.19□□□□□ -0.46
NCDNQ9UBB6 SCAMP1-207ENST00000621999 4509 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NCDNQ9UBB6 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NCDNQ9UBB6 OGDH-203ENST00000439616 2962 ntTSL 2 BASIC12.19□□□□□ -0.46
NCDNQ9UBB6 HYPK-203ENST00000458412 1712 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
NCDNQ9UBB6 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC12.19□□□□□ -0.46
NCDNQ9UBB6 ZSCAN32-203ENST00000396852 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NCDNQ9UBB6 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NCDNQ9UBB6 ZNF571-AS1-203ENST00000586139 2684 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NCDNQ9UBB6 AC015819.3-201ENST00000624305 2674 ntBASIC12.19□□□□□ -0.46
NCDNQ9UBB6 CYFIP2-222ENST00000620254 4124 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NCDNQ9UBB6 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
NCDNQ9UBB6 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NCDNQ9UBB6 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NCDNQ9UBB6 STAT3-202ENST00000389272 2615 ntTSL 2 BASIC12.19□□□□□ -0.46
NCDNQ9UBB6 LINC00563-201ENST00000566370 1400 ntBASIC12.19□□□□□ -0.46
NCDNQ9UBB6 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
NCDNQ9UBB6 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NCDNQ9UBB6 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
NCDNQ9UBB6 RHOH-222ENST00000617441 1872 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
NCDNQ9UBB6 MLPH-202ENST00000338530 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
NCDNQ9UBB6 COX6B2-209ENST00000590900 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NCDNQ9UBB6 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC12.18□□□□□ -0.46
NCDNQ9UBB6 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NCDNQ9UBB6 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NCDNQ9UBB6 SRP72-205ENST00000510663 2473 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NCDNQ9UBB6 PIMREG-206ENST00000572595 1551 ntTSL 3 BASIC12.18□□□□□ -0.46
NCDNQ9UBB6 EMBP1-203ENST00000622787 4235 ntTSL 2 BASIC12.18□□□□□ -0.46
NCDNQ9UBB6 USP2-AS1-202ENST00000500970 1784 ntTSL 2 BASIC12.18□□□□□ -0.46
NCDNQ9UBB6 HNRNPMP1-201ENST00000560685 1768 ntBASIC12.18□□□□□ -0.46
NCDNQ9UBB6 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
NCDNQ9UBB6 CCDC33-206ENST00000558821 1993 ntTSL 2 BASIC12.18□□□□□ -0.46
NCDNQ9UBB6 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
NCDNQ9UBB6 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NCDNQ9UBB6 HECW2-202ENST00000409111 6692 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NCDNQ9UBB6 WISP1-201ENST00000220856 1205 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NCDNQ9UBB6 PTPRG-201ENST00000295874 4650 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
NCDNQ9UBB6 CCL26-202ENST00000394905 703 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NCDNQ9UBB6 AL354707.2-201ENST00000412339 422 ntTSL 2 BASIC12.18□□□□□ -0.46
NCDNQ9UBB6 AL732414.1-201ENST00000413346 573 ntBASIC12.18□□□□□ -0.46
NCDNQ9UBB6 AL392185.1-201ENST00000419620 395 ntTSL 2 BASIC12.18□□□□□ -0.46
NCDNQ9UBB6 PGC-204ENST00000425343 1152 ntTSL 2 BASIC12.18□□□□□ -0.46
NCDNQ9UBB6 SNHG15-201ENST00000438705 509 ntTSL 3 BASIC12.18□□□□□ -0.46
NCDNQ9UBB6 CR769776.2-201ENST00000445057 378 ntBASIC12.18□□□□□ -0.46
NCDNQ9UBB6 KRT42P-203ENST00000458343 671 ntBASIC12.18□□□□□ -0.46
NCDNQ9UBB6 RN7SL728P-201ENST00000464718 300 ntBASIC12.18□□□□□ -0.46
NCDNQ9UBB6 AC026785.1-201ENST00000505520 580 ntBASIC12.18□□□□□ -0.46
NCDNQ9UBB6 AC016924.1-202ENST00000512435 447 ntTSL 3 BASIC12.18□□□□□ -0.46
NCDNQ9UBB6 MARCH3-205ENST00000515241 719 ntTSL 2 BASIC12.18□□□□□ -0.46
NCDNQ9UBB6 AC025265.1-202ENST00000550029 738 ntTSL 5 BASIC12.18□□□□□ -0.46
NCDNQ9UBB6 AC066612.1-203ENST00000560623 481 ntTSL 4 BASIC12.18□□□□□ -0.46
NCDNQ9UBB6 AC020663.1-201ENST00000588099 556 ntTSL 4 BASIC12.18□□□□□ -0.46
NCDNQ9UBB6 MXRA7-205ENST00000588114 521 ntAPPRIS ALT2 TSL 4 BASIC12.18□□□□□ -0.46
NCDNQ9UBB6 LINC01535-204ENST00000591116 815 ntTSL 3 BASIC12.18□□□□□ -0.46
NCDNQ9UBB6 AC242988.1-201ENST00000611044 714 ntTSL 3 BASIC12.18□□□□□ -0.46
NCDNQ9UBB6 AL031430.1-201ENST00000642067 1039 ntBASIC12.18□□□□□ -0.46
NCDNQ9UBB6 MYRF-201ENST00000265460 5745 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
NCDNQ9UBB6 ZNF564-201ENST00000339282 2935 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NCDNQ9UBB6 DPF2-202ENST00000415073 2085 ntTSL 2 BASIC12.18□□□□□ -0.46
NCDNQ9UBB6 COL19A1-205ENST00000620364 6233 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NCDNQ9UBB6 LAS1L-201ENST00000374804 2261 ntTSL 2 BASIC12.18□□□□□ -0.46
NCDNQ9UBB6 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC12.18□□□□□ -0.46
NCDNQ9UBB6 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NCDNQ9UBB6 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NCDNQ9UBB6 FHL2-204ENST00000393352 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NCDNQ9UBB6 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC12.18□□□□□ -0.46
NCDNQ9UBB6 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NCDNQ9UBB6 NOP2-212ENST00000541778 3038 ntTSL 2 BASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms