Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 TATDN2P2-201ENST00000403590 2226 ntBASIC12.86□□□□□ -0.35
SLC1A1P43005 ABCD1-201ENST00000218104 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SLC1A1P43005 KBTBD3-205ENST00000531837 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SLC1A1P43005 RNF125-201ENST00000217740 6020 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SLC1A1P43005 C3orf35-205ENST00000426078 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SLC1A1P43005 PJA1-204ENST00000374584 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SLC1A1P43005 AC027682.7-201ENST00000623147 2121 ntBASIC12.86□□□□□ -0.35
SLC1A1P43005 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
SLC1A1P43005 KBTBD6-201ENST00000379485 5178 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
SLC1A1P43005 SYTL2-206ENST00000389960 4299 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
SLC1A1P43005 GALNT14-203ENST00000406653 2496 ntTSL 2 BASIC12.86□□□□□ -0.35
SLC1A1P43005 SEPT4-204ENST00000412945 1597 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
SLC1A1P43005 MINDY1-203ENST00000361936 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SLC1A1P43005 PLSCR4-203ENST00000433593 2839 ntTSL 2 BASIC12.86□□□□□ -0.35
SLC1A1P43005 ARMC1-202ENST00000458464 2849 ntTSL 2 BASIC12.86□□□□□ -0.35
SLC1A1P43005 ZNF552-201ENST00000391701 2352 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
SLC1A1P43005 CHRNA2-202ENST00000407991 4067 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
SLC1A1P43005 AKT2-201ENST00000311278 1393 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SLC1A1P43005 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC12.86□□□□□ -0.35
SLC1A1P43005 CARF-213ENST00000438828 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SLC1A1P43005 ANAPC15-201ENST00000227618 886 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
SLC1A1P43005 WNT4-201ENST00000290167 3845 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SLC1A1P43005 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC12.86□□□□□ -0.35
SLC1A1P43005 AL627389.1-201ENST00000413508 1182 ntBASIC12.86□□□□□ -0.35
SLC1A1P43005 AL392185.1-201ENST00000419620 395 ntTSL 2 BASIC12.86□□□□□ -0.35
SLC1A1P43005 AL355493.1-201ENST00000422707 808 ntBASIC12.86□□□□□ -0.35
SLC1A1P43005 AL359092.2-201ENST00000423330 585 ntBASIC12.86□□□□□ -0.35
SLC1A1P43005 AC007312.1-201ENST00000427493 258 ntBASIC12.86□□□□□ -0.35
SLC1A1P43005 NME6-208ENST00000435684 599 ntTSL 2 BASIC12.86□□□□□ -0.35
SLC1A1P43005 AC118553.1-201ENST00000454219 655 ntTSL 2 BASIC12.86□□□□□ -0.35
SLC1A1P43005 RN7SL2-201ENST00000490232 300 ntBASIC12.86□□□□□ -0.35
SLC1A1P43005 AC087442.1-201ENST00000525563 249 ntTSL 2 BASIC12.86□□□□□ -0.35
SLC1A1P43005 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
SLC1A1P43005 ACY3-202ENST00000529256 933 ntTSL 3 BASIC12.86□□□□□ -0.35
SLC1A1P43005 PHLDB1-217ENST00000530708 874 ntTSL 5 BASIC12.86□□□□□ -0.35
SLC1A1P43005 RPLP0-205ENST00000546989 993 ntTSL 5 BASIC12.86□□□□□ -0.35
SLC1A1P43005 ATP6V1D-209ENST00000555431 1085 ntTSL 5 BASIC12.86□□□□□ -0.35
SLC1A1P43005 ATP6V1D-210ENST00000555474 1102 ntTSL 5 BASIC12.86□□□□□ -0.35
SLC1A1P43005 PEX11A-204ENST00000561224 529 ntTSL 4 BASIC12.86□□□□□ -0.35
SLC1A1P43005 AC009086.1-201ENST00000567219 309 ntBASIC12.86□□□□□ -0.35
SLC1A1P43005 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC12.86□□□□□ -0.35
SLC1A1P43005 RN7SL524P-201ENST00000581152 300 ntBASIC12.86□□□□□ -0.35
SLC1A1P43005 SNORD55-201ENST00000581525 80 ntBASIC12.86□□□□□ -0.35
SLC1A1P43005 MIR4526-201ENST00000583168 87 ntBASIC12.86□□□□□ -0.35
SLC1A1P43005 RN7SL4P-201ENST00000584058 295 ntBASIC12.86□□□□□ -0.35
SLC1A1P43005 NSRP1-213ENST00000584423 482 ntTSL 2 BASIC12.86□□□□□ -0.35
SLC1A1P43005 AC136475.1-203ENST00000602756 1034 ntTSL 3 BASIC12.86□□□□□ -0.35
SLC1A1P43005 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC12.86□□□□□ -0.35
SLC1A1P43005 KRTAP10-4-202ENST00000616689 597 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
SLC1A1P43005 Metazoa_SRP.174-201ENST00000619127 283 ntBASIC12.86□□□□□ -0.35
SLC1A1P43005 WDR47-203ENST00000369962 4199 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SLC1A1P43005 KDM4E-201ENST00000450979 2339 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
SLC1A1P43005 SEC61A1-203ENST00000464451 1871 ntTSL 2 BASIC12.86□□□□□ -0.35
SLC1A1P43005 E2F8-205ENST00000620009 3519 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
SLC1A1P43005 SYNRG-229ENST00000621136 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SLC1A1P43005 AAK1-201ENST00000406297 4499 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SLC1A1P43005 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SLC1A1P43005 EPB41L5-205ENST00000452780 6410 ntTSL 5 BASIC12.86□□□□□ -0.35
SLC1A1P43005 STRADA-205ENST00000447001 2014 ntTSL 2 BASIC12.86□□□□□ -0.35
SLC1A1P43005 NBPF1-204ENST00000432949 4176 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
SLC1A1P43005 AL008628.1-201ENST00000564198 5187 ntBASIC12.86□□□□□ -0.35
SLC1A1P43005 TMEM239-201ENST00000361033 3892 ntTSL 2 BASIC12.86□□□□□ -0.35
SLC1A1P43005 ABR-201ENST00000291107 2673 ntTSL 2 BASIC12.85□□□□□ -0.35
SLC1A1P43005 FAM84A-202ENST00000331243 3765 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
SLC1A1P43005 RPL10-204ENST00000424325 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SLC1A1P43005 MRVI1-214ENST00000534266 2824 ntTSL 2 BASIC12.85□□□□□ -0.35
SLC1A1P43005 DAP3-203ENST00000421487 1470 ntTSL 2 BASIC12.85□□□□□ -0.35
SLC1A1P43005 AP000866.2-201ENST00000504932 1493 ntTSL 2 BASIC12.85□□□□□ -0.35
SLC1A1P43005 BCL9-201ENST00000234739 6278 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SLC1A1P43005 GP2-202ENST00000341642 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SLC1A1P43005 SHANK2-203ENST00000409161 9208 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SLC1A1P43005 WFS1-201ENST00000226760 3640 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SLC1A1P43005 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SLC1A1P43005 ARHGAP27-202ENST00000376922 3628 ntTSL 2 BASIC12.85□□□□□ -0.35
SLC1A1P43005 PIK3R3-204ENST00000423209 1884 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SLC1A1P43005 EBF1-201ENST00000313708 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SLC1A1P43005 PCDHGB5-201ENST00000617380 4578 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
SLC1A1P43005 MED27-202ENST00000357028 1281 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SLC1A1P43005 LHX9-202ENST00000367388 758 ntTSL 2 BASIC12.85□□□□□ -0.35
SLC1A1P43005 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
SLC1A1P43005 U73169.1-201ENST00000395152 367 ntBASIC12.85□□□□□ -0.35
SLC1A1P43005 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SLC1A1P43005 ATXN8OS-201ENST00000414504 1148 ntTSL 5 BASIC12.85□□□□□ -0.35
SLC1A1P43005 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC12.85□□□□□ -0.35
SLC1A1P43005 HTR3D-203ENST00000428798 1215 ntTSL 5 BASIC12.85□□□□□ -0.35
SLC1A1P43005 HTR3D-204ENST00000453435 1043 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SLC1A1P43005 AC106748.1-201ENST00000454801 384 ntBASIC12.85□□□□□ -0.35
SLC1A1P43005 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SLC1A1P43005 RN7SL681P-201ENST00000482763 292 ntBASIC12.85□□□□□ -0.35
SLC1A1P43005 RBM4-207ENST00000506523 654 ntTSL 3 BASIC12.85□□□□□ -0.35
SLC1A1P43005 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC12.85□□□□□ -0.35
SLC1A1P43005 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC12.85□□□□□ -0.35
SLC1A1P43005 SLC13A2-205ENST00000545060 1276 ntTSL 5 BASIC12.85□□□□□ -0.35
SLC1A1P43005 AC068987.2-201ENST00000565518 896 ntBASIC12.85□□□□□ -0.35
SLC1A1P43005 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SLC1A1P43005 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
SLC1A1P43005 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC12.85□□□□□ -0.35
SLC1A1P43005 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC12.85□□□□□ -0.35
SLC1A1P43005 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC12.85□□□□□ -0.35
SLC1A1P43005 AC092120.3-201ENST00000605168 568 ntBASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms