Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC11.29□□□□□ -0.6
NPIPA3F8WFD2 GUCY1A3-213ENST00000621234 1788 ntTSL 5 BASIC11.29□□□□□ -0.6
NPIPA3F8WFD2 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
NPIPA3F8WFD2 ABL2-210ENST00000511413 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
NPIPA3F8WFD2 NCBP2L-202ENST00000639756 1953 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
NPIPA3F8WFD2 IFT74-201ENST00000380062 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
NPIPA3F8WFD2 PML-207ENST00000435786 3643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
NPIPA3F8WFD2 TNNT2-201ENST00000236918 1098 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
NPIPA3F8WFD2 OR2T27-201ENST00000344889 954 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
NPIPA3F8WFD2 VKORC1-203ENST00000354895 901 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
NPIPA3F8WFD2 MIR193A-201ENST00000384882 88 ntBASIC11.29□□□□□ -0.6
NPIPA3F8WFD2 RPL17P34-201ENST00000394133 555 ntBASIC11.29□□□□□ -0.6
NPIPA3F8WFD2 AL049792.1-201ENST00000424708 1262 ntBASIC11.29□□□□□ -0.6
NPIPA3F8WFD2 AL121761.1-203ENST00000426012 677 ntTSL 3 BASIC11.29□□□□□ -0.6
NPIPA3F8WFD2 SNAP25-AS1-202ENST00000426491 804 ntTSL 5 BASIC11.29□□□□□ -0.6
NPIPA3F8WFD2 AC092100.1-201ENST00000435148 702 ntTSL 3 BASIC11.29□□□□□ -0.6
NPIPA3F8WFD2 CNTFR-AS1-201ENST00000436360 892 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
NPIPA3F8WFD2 CNTFR-AS1-203ENST00000453642 723 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
NPIPA3F8WFD2 LINC01524-202ENST00000454600 745 ntTSL 3 BASIC11.29□□□□□ -0.6
NPIPA3F8WFD2 EEF1GP1-201ENST00000457231 1299 ntBASIC11.29□□□□□ -0.6
NPIPA3F8WFD2 CDHR4-205ENST00000487256 1017 ntTSL 5 BASIC11.29□□□□□ -0.6
NPIPA3F8WFD2 SPTY2D1-AS1-202ENST00000511927 573 ntAPPRIS ALT2 TSL 4 BASIC11.29□□□□□ -0.6
NPIPA3F8WFD2 PTPN20-229ENST00000513756 640 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
NPIPA3F8WFD2 NEMF-210ENST00000556672 590 ntTSL 2 BASIC11.29□□□□□ -0.6
NPIPA3F8WFD2 AC103810.4-201ENST00000578601 257 ntBASIC11.29□□□□□ -0.6
NPIPA3F8WFD2 AC005154.1-227ENST00000579174 755 ntTSL 3 BASIC11.29□□□□□ -0.6
NPIPA3F8WFD2 AC048380.1-201ENST00000589818 465 ntTSL 3 BASIC11.29□□□□□ -0.6
NPIPA3F8WFD2 PDE4C-213ENST00000598111 1284 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
NPIPA3F8WFD2 MIR6893-201ENST00000613458 69 ntBASIC11.29□□□□□ -0.6
NPIPA3F8WFD2 AL158032.2-201ENST00000616818 195 ntBASIC11.29□□□□□ -0.6
NPIPA3F8WFD2 LIN28B-AS1-204ENST00000636951 610 ntTSL 5 BASIC11.29□□□□□ -0.6
NPIPA3F8WFD2 LINC01988-202ENST00000636975 921 ntTSL 5 BASIC11.29□□□□□ -0.6
NPIPA3F8WFD2 AMT-221ENST00000538581 2038 ntTSL 2 BASIC11.29□□□□□ -0.6
NPIPA3F8WFD2 AL391294.1-201ENST00000641352 4068 ntBASIC11.29□□□□□ -0.6
NPIPA3F8WFD2 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
NPIPA3F8WFD2 GEMIN8-202ENST00000380523 1682 ntAPPRIS P2 TSL 2 BASIC11.29□□□□□ -0.6
NPIPA3F8WFD2 LYRM1-202ENST00000396052 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
NPIPA3F8WFD2 DNM1P41-201ENST00000623634 3350 ntBASIC11.29□□□□□ -0.6
NPIPA3F8WFD2 GRIN2A-206ENST00000562109 4338 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
NPIPA3F8WFD2 SCN3B-206ENST00000530277 3984 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
NPIPA3F8WFD2 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
NPIPA3F8WFD2 IGF2BP2-204ENST00000457616 3426 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
NPIPA3F8WFD2 TIFAB-201ENST00000537858 5923 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
NPIPA3F8WFD2 C6orf163-203ENST00000608326 2110 ntTSL 2 BASIC11.29□□□□□ -0.6
NPIPA3F8WFD2 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
NPIPA3F8WFD2 CCBE1-202ENST00000439986 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
NPIPA3F8WFD2 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
NPIPA3F8WFD2 AL356583.1-201ENST00000398739 1371 ntBASIC11.28□□□□□ -0.6
NPIPA3F8WFD2 LVRN-202ENST00000395528 4544 ntTSL 5 BASIC11.28□□□□□ -0.6
NPIPA3F8WFD2 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
NPIPA3F8WFD2 AC131902.2-201ENST00000566892 2172 ntBASIC11.28□□□□□ -0.6
NPIPA3F8WFD2 C5orf15-201ENST00000231512 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
NPIPA3F8WFD2 ATG13-211ENST00000528494 2351 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
NPIPA3F8WFD2 WASHC5-201ENST00000318410 4187 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
NPIPA3F8WFD2 LPIN3-201ENST00000373257 4363 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
NPIPA3F8WFD2 STARD13-201ENST00000255486 5798 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
NPIPA3F8WFD2 STARD13-204ENST00000399365 5784 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
NPIPA3F8WFD2 APTX-206ENST00000379825 2023 ntTSL 2 BASIC11.28□□□□□ -0.6
NPIPA3F8WFD2 KCNAB2-201ENST00000164247 4273 ntAPPRIS P4 TSL 2 BASIC11.28□□□□□ -0.6
NPIPA3F8WFD2 COMMD10-207ENST00000632434 1433 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
NPIPA3F8WFD2 SNX14-201ENST00000314673 3486 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
NPIPA3F8WFD2 ATAT1-202ENST00000319027 2061 ntTSL 2 BASIC11.28□□□□□ -0.6
NPIPA3F8WFD2 AC079779.1-201ENST00000437798 4775 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
NPIPA3F8WFD2 SNRNP48-201ENST00000342415 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
NPIPA3F8WFD2 EPS15L1-201ENST00000248070 2924 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
NPIPA3F8WFD2 USP3-213ENST00000559711 1693 ntTSL 5 BASIC11.28□□□□□ -0.6
NPIPA3F8WFD2 AC011525.2-202ENST00000590611 1657 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
NPIPA3F8WFD2 AOX3P-202ENST00000469595 1471 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
NPIPA3F8WFD2 CICP2-201ENST00000420675 2328 ntBASIC11.28□□□□□ -0.6
NPIPA3F8WFD2 MIR219A2-202ENST00000385220 97 ntBASIC11.28□□□□□ -0.6
NPIPA3F8WFD2 IGLV3-21-201ENST00000390308 602 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
NPIPA3F8WFD2 SLC38A1-201ENST00000398637 8066 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
NPIPA3F8WFD2 IFITM2-202ENST00000399817 659 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
NPIPA3F8WFD2 MBL3P-201ENST00000402234 644 ntBASIC11.28□□□□□ -0.6
NPIPA3F8WFD2 ANO7-203ENST00000402530 894 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
NPIPA3F8WFD2 OR2A14-201ENST00000408899 1012 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
NPIPA3F8WFD2 PIN1P1-202ENST00000439639 301 ntBASIC11.28□□□□□ -0.6
NPIPA3F8WFD2 AC092295.1-201ENST00000446262 434 ntTSL 3 BASIC11.28□□□□□ -0.6
NPIPA3F8WFD2 AC005042.2-201ENST00000449526 510 ntTSL 4 BASIC11.28□□□□□ -0.6
NPIPA3F8WFD2 LINC01428-201ENST00000449581 874 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
NPIPA3F8WFD2 AL592463.1-201ENST00000451108 635 ntTSL 3 BASIC11.28□□□□□ -0.6
NPIPA3F8WFD2 LINC00877-202ENST00000464271 552 ntTSL 4 BASIC11.28□□□□□ -0.6
NPIPA3F8WFD2 AL139807.1-201ENST00000500636 704 ntTSL 3 BASIC11.28□□□□□ -0.6
NPIPA3F8WFD2 ZNF576-204ENST00000528387 859 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
NPIPA3F8WFD2 ZNF7-209ENST00000529819 513 ntTSL 4 BASIC11.28□□□□□ -0.6
NPIPA3F8WFD2 TRIAP1-202ENST00000546954 1182 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
NPIPA3F8WFD2 LINC02395-202ENST00000547443 724 ntTSL 3 BASIC11.28□□□□□ -0.6
NPIPA3F8WFD2 GSKIP-203ENST00000554182 760 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
NPIPA3F8WFD2 TMEM253-206ENST00000556585 1236 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
NPIPA3F8WFD2 ZFAND6-220ENST00000561060 891 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
NPIPA3F8WFD2 AP002414.5-201ENST00000591853 258 ntTSL 4 BASIC11.28□□□□□ -0.6
NPIPA3F8WFD2 AP000892.2-201ENST00000613535 324 ntBASIC11.28□□□□□ -0.6
NPIPA3F8WFD2 FAM69A-204ENST00000615519 865 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
NPIPA3F8WFD2 LINC00664-201ENST00000596203 1742 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
NPIPA3F8WFD2 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
NPIPA3F8WFD2 AC048382.5-201ENST00000618330 3667 ntTSL 5 BASIC11.28□□□□□ -0.6
NPIPA3F8WFD2 AC110048.1-201ENST00000604293 2157 ntBASIC11.28□□□□□ -0.6
NPIPA3F8WFD2 PRAMEF20-202ENST00000602960 1502 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
NPIPA3F8WFD2 AREL1-201ENST00000356357 5456 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
NPIPA3F8WFD2 FCHO1-234ENST00000600676 3094 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms